| Chain sequence(s) |
A: EVQLVESGGGLVQAGGSLRLSCAASGITFSINTMGWYRQAPGKQRELVALISSIGDTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCKRFRTAAQGTDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1757 | |
| 2 | V | A | -1.3304 | |
| 3 | Q | A | -1.2900 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.0685 | |
| 6 | E | A | -0.0185 | |
| 7 | S | A | -0.5520 | |
| 8 | G | A | -1.2552 | |
| 9 | G | A | -0.8807 | |
| 10 | G | A | -0.0725 | |
| 11 | L | A | 1.0509 | |
| 12 | V | A | -0.0004 | |
| 13 | Q | A | -1.2436 | |
| 14 | A | A | -1.4275 | |
| 15 | G | A | -1.3110 | |
| 16 | G | A | -0.8693 | |
| 17 | S | A | -1.2262 | |
| 18 | L | A | -0.9165 | |
| 19 | R | A | -2.1537 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4339 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1892 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0693 | |
| 26 | G | A | -1.3232 | |
| 27 | I | A | -0.4275 | |
| 28 | T | A | 0.0467 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | 0.4107 | |
| 31 | I | A | 1.4227 | |
| 32 | N | A | 0.0000 | |
| 33 | T | A | 0.1035 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.3026 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -2.1624 | |
| 40 | A | A | -2.0129 | |
| 41 | P | A | -1.3874 | |
| 42 | G | A | -1.8687 | |
| 43 | K | A | -3.1866 | |
| 44 | Q | A | -3.2205 | |
| 45 | R | A | -2.9607 | |
| 46 | E | A | -2.2306 | |
| 47 | L | A | -0.2458 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | L | A | 0.5490 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 0.3057 | |
| 53 | S | A | 0.7823 | |
| 54 | I | A | 1.5383 | |
| 55 | G | A | -0.1469 | |
| 56 | D | A | -1.1215 | |
| 57 | T | A | -0.0173 | |
| 58 | Y | A | 0.6865 | |
| 59 | Y | A | -0.0993 | |
| 60 | A | A | -0.9799 | |
| 61 | D | A | -2.3487 | |
| 62 | S | A | -1.7698 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.4550 | |
| 65 | G | A | -1.7849 | |
| 66 | R | A | -1.5938 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.6881 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.6523 | |
| 71 | R | A | -1.1356 | |
| 72 | D | A | -1.6870 | |
| 73 | N | A | -1.8230 | |
| 74 | A | A | -1.5441 | |
| 75 | K | A | -2.3937 | |
| 76 | N | A | -1.8668 | |
| 77 | T | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.6348 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.3161 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.5282 | |
| 84 | S | A | -1.2052 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.1583 | |
| 87 | P | A | -1.7925 | |
| 88 | E | A | -2.2536 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.9334 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.7382 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.2973 | |
| 95 | C | A | 0.0000 | |
| 96 | K | A | 0.0000 | |
| 97 | R | A | 0.0000 | |
| 98 | F | A | -0.5962 | |
| 99 | R | A | -1.8187 | |
| 100 | T | A | -0.8672 | |
| 101 | A | A | -0.5757 | |
| 102 | A | A | -0.5704 | |
| 103 | Q | A | -1.1446 | |
| 104 | G | A | -1.1550 | |
| 105 | T | A | -0.8571 | |
| 106 | D | A | -0.7493 | |
| 107 | Y | A | -0.0221 | |
| 108 | W | A | 0.3409 | |
| 109 | G | A | -0.0853 | |
| 110 | Q | A | -0.9200 | |
| 111 | G | A | -0.6053 | |
| 112 | T | A | -0.8154 | |
| 113 | Q | A | -1.1370 | |
| 114 | V | A | 0.0000 | |
| 115 | T | A | -0.3401 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | -0.7723 | |
| 118 | S | A | -0.8311 |