Project name: KKGHKGH20

Status: done

Started: 2026-05-21 12:40:12
Settings
Chain sequence(s) A: KKGHKGH
C: KKGHKGH
B: KKGHKGH
E: KKGHKGH
D: KKGHKGH
G: KKGHKGH
F: KKGHKGH
I: KKGHKGH
H: KKGHKGH
K: KKGHKGH
J: KKGHKGH
M: KKGHKGH
L: KKGHKGH
O: KKGHKGH
N: KKGHKGH
Q: KKGHKGH
P: KKGHKGH
S: KKGHKGH
R: KKGHKGH
T: KKGHKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:20)
Show buried residues

Minimal score value
-5.1196
Maximal score value
0.0
Average score
-3.2985
Total score value
-461.7871

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -3.4672
2 K A -5.1196
3 G A -3.8926
4 H A -4.1321
5 K A -4.6778
6 G A -3.1454
7 H A -3.7128
1 K B -5.0930
2 K B -4.7265
3 G B -4.4964
4 H B -4.5261
5 K B -4.2849
6 G B 0.0000
7 H B -3.5216
1 K C -3.5673
2 K C -4.0222
3 G C -3.8707
4 H C -3.6755
5 K C -3.2883
6 G C -2.2294
7 H C -2.3214
1 K D -3.3961
2 K D -3.5732
3 G D 0.0000
4 H D -2.9696
5 K D -2.9457
6 G D 0.0000
7 H D -1.6943
1 K E -4.3189
2 K E -3.8187
3 G E 0.0000
4 H E -3.1351
5 K E -2.9621
6 G E 0.0000
7 H E -2.9981
1 K F -3.1398
2 K F -3.6413
3 G F -3.8532
4 H F -4.1567
5 K F -4.3333
6 G F -3.2119
7 H F -3.0468
1 K G -3.6804
2 K G -3.6167
3 G G -2.9011
4 H G -3.0404
5 K G -3.0779
6 G G -2.0632
7 H G -3.0115
1 K H -2.7624
2 K H -3.4574
3 G H -2.7898
4 H H -2.8978
5 K H -3.3574
6 G H 0.0000
7 H H -2.9190
1 K I -3.1493
2 K I -3.7063
3 G I -3.1581
4 H I -3.6282
5 K I -3.7572
6 G I -2.6619
7 H I -2.6421
1 K J -3.3179
2 K J -3.6910
3 G J -3.6629
4 H J -3.7690
5 K J -4.1503
6 G J 0.0000
7 H J -3.2148
1 K K -3.2290
2 K K -4.1952
3 G K -3.4573
4 H K -3.9145
5 K K -3.9357
6 G K -2.6767
7 H K -2.8880
1 K L -3.5997
2 K L -3.9537
3 G L -3.9363
4 H L -3.3984
5 K L -3.1765
6 G L -2.4130
7 H L -2.8860
1 K M -3.1910
2 K M -4.3345
3 G M -3.4236
4 H M -3.7688
5 K M -4.3800
6 G M 0.0000
7 H M -3.7083
1 K N -4.3906
2 K N -4.1107
3 G N -3.7061
4 H N -3.8123
5 K N -3.6710
6 G N -2.8850
7 H N -2.4639
1 K O -3.5081
2 K O -3.6350
3 G O -3.0181
4 H O -3.3894
5 K O -3.3100
6 G O -2.1815
7 H O -1.9675
1 K P -3.7280
2 K P -4.4748
3 G P -4.3761
4 H P -4.1435
5 K P -3.6586
6 G P -2.3878
7 H P -2.0032
1 K Q -3.6361
2 K Q -3.8290
3 G Q -3.1682
4 H Q -3.8060
5 K Q -4.2806
6 G Q -4.0467
7 H Q -4.5008
1 K R -2.9936
2 K R -3.4376
3 G R -3.4865
4 H R -3.6122
5 K R -3.8101
6 G R -3.2163
7 H R -2.1601
1 K S -3.1784
2 K S -4.1962
3 G S -4.4214
4 H S -4.8013
5 K S -4.6370
6 G S -3.1473
7 H S -2.9872
1 K T -4.4711
2 K T -4.9937
3 G T -4.3349
4 H T -3.4156
5 K T -3.3608
6 G T -1.8184
7 H T -1.7030
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Laboratory of Theory of Biopolymers 2018