Project name: Leb-G96A-LV3Q-HG96A-HA10G-HT19S-HV79S-HV88A-HL112T [mutate: VQ3L, AG10H, TS19H, VS79H, VA85H, GA96H, LT108H] [mutate: AV85H]

Status: done

Started: 2026-05-07 02:31:45
Settings
Chain sequence(s) H: QVTLRESGPGLVKPTQTLSLTCTVSGFSLSAYSVNWIRQPPGKALEWLAMIWGDGKIVYNSALKSRLTISKDTSKNQVSLTMTNMDPADTATYYCAGDAYYPYAMDNWGQGSTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK
L: DIQMTQSPDSLSVSLGERATINCRASKSVDSYGNSFMHWYQQKPGQPPKLLIYLASNLESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQNNEDPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
input PDB
Selected Chain(s) H,L
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues AV85H
Energy difference between WT (input) and mutated protein (by FoldX) 0.276366 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:02:45)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:52)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:01)
Show buried residues

Minimal score value
-2.1956
Maximal score value
1.7286
Average score
-0.2899
Total score value
-126.6834

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.1121
2 V H 0.2218
3 T H 0.0564
4 L H 0.0000
5 R H -1.6009
6 E H -0.5435
7 S H -0.3056
8 G H -0.3421
9 P H -0.1803
10 G H -0.0517
11 L H 0.2921
12 V H 0.0000
13 K H -1.7099
14 P H -0.3717
15 T H -0.5064
16 Q H -1.1548
17 T H -0.2651
18 L H 0.0000
19 S H -0.2111
20 L H 0.0000
21 T H -0.0263
22 C H 0.0000
23 T H -0.0631
24 V H 0.0000
25 S H -0.1670
26 G H -0.3091
27 F H 0.4792
28 S H -0.0671
29 L H 0.0000
30 S H -0.2088
31 A H 0.0131
32 Y H 0.0000
33 S H 0.0000
34 V H 0.0000
35 N H 0.0000
36 W H 0.0000
37 I H 0.0000
38 R H 0.0000
39 Q H -0.1483
40 P H -0.1080
41 P H -0.3455
42 G H -0.8195
43 K H -1.7809
44 A H -0.2853
45 L H 0.0000
46 E H -0.5131
47 W H 0.0000
48 L H 0.0000
49 A H 0.0000
50 M H 0.0000
51 I H 0.0000
52 W H 0.2023
53 G H -0.3542
54 D H -1.8483
55 G H -0.9027
56 K H -1.5499
57 I H 0.8058
58 V H 0.0000
59 Y H 0.1811
60 N H -0.1459
61 S H -0.1895
62 A H 0.0579
63 L H -0.1297
64 K H -1.7081
65 S H -0.5784
66 R H -0.3744
67 L H 0.0000
68 T H -0.0549
69 I H 0.0000
70 S H -0.2048
71 K H -0.5572
72 D H -0.8161
73 T H -0.2664
74 S H -0.5329
75 K H -1.7763
76 N H -0.5925
77 Q H -0.4166
78 V H 0.0000
79 S H -0.0962
80 L H 0.0000
81 T H -0.0474
82 M H 0.0000
82A T H -0.2574
82B N H -1.2890
82C M H 0.0000
83 D H -1.1355
84 P H -0.1392
85 V H 1.7286 mutated: AV85H
86 D H 0.0000
87 T H -0.0104
88 A H 0.0000
89 T H -0.0143
90 Y H 0.0000
91 Y H 0.0000
92 C H 0.0000
93 A H 0.0000
94 G H 0.0000
95 D H 0.0000
96 A H 0.2542
97 Y H 1.5535
98 Y H 1.6202
99 P H 0.0000
100 Y H 0.7094
100A A H 0.0000
100B M H 0.0000
101 D H -1.0799
102 N H -0.3534
103 W H 0.0827
104 G H 0.0000
105 Q H -1.2181
106 G H -0.3337
107 S H -0.0527
108 T H -0.0217
109 V H 0.0000
110 T H 0.0000
111 V H 0.0000
112 S H -0.0724
113 S H -0.2125
114 A H -0.0396
115 S H -0.2113
116 T H -0.2132
117 K H -0.8293
118 G H -0.2687
119 P H -0.0645
120 S H -0.0550
121 V H 0.1694
122 F H 0.0000
123 P H -0.0331
124 L H 0.0000
125 A H 0.0000
126 P H 0.0000
127 C H 0.1192
128 S H -0.2858
129 R H -0.6206
130 S H -0.2823
131 T H -0.1385
132 S H -0.3898
133 E H -0.9963
134 S H -0.3856
135 T H -0.1042
136 A H 0.0000
137 A H 0.0000
138 L H 0.0000
139 G H 0.0000
140 C H 0.0000
141 L H 0.0000
142 V H 0.0000
143 K H 0.0000
144 D H -0.3140
145 Y H 0.0000
146 F H 0.0000
147 P H 0.0000
148 E H -0.3088
149 P H -0.2027
150 V H 0.1331
151 T H -0.0022
152 V H 0.1780
153 S H -0.0222
154 W H 0.0000
155 N H -0.2523
156 S H -0.3366
157 G H -0.4944
158 A H 0.0162
159 L H 0.2264
160 T H -0.0673
161 S H -0.2741
162 G H -0.2433
163 V H 0.2870
164 H H -0.0472
165 T H -0.0498
166 F H 0.0000
167 P H -0.2153
168 A H 0.0450
169 V H 0.5829
170 L H 1.3140
171 Q H 0.0485
172 S H -0.2767
173 S H -0.2933
174 G H -0.2220
175 L H 0.2338
176 Y H 0.3663
177 S H 0.0000
178 L H 0.0000
179 S H 0.0000
180 S H 0.0000
181 V H 0.0000
182 V H 0.0000
183 T H -0.0095
184 V H 0.0000
185 P H -0.2751
186 S H -0.1724
187 S H -0.2337
188 S H -0.0068
189 L H 0.2445
190 G H -0.4178
191 T H -0.3874
192 K H -1.3487
193 T H -0.2692
194 Y H 0.0000
195 T H -0.3076
196 C H 0.0000
197 N H -0.3924
198 V H 0.0000
199 D H -0.6491
200 H H 0.0000
201 K H -1.8665
202 P H -0.3667
203 S H -0.3003
204 N H -1.4969
205 T H -0.5508
206 K H -1.6906
207 V H -0.2678
208 D H -1.7879
209 K H -0.9161
210 R H -1.8917
211 V H 0.0000
212 E H -1.8270
213 S H -0.6698
214 K H -1.7068
1 D L -1.7894
2 I L 0.0000
3 Q L -1.1675
4 M L 0.0000
5 T L -0.0931
6 Q L -0.1700
7 S L -0.2564
8 P L -0.5186
9 D L -1.8323
10 S L -0.4209
11 L L 0.1321
12 S L -0.1532
13 V L 0.1529
14 S L 0.0380
15 L L 1.3741
16 G L -0.4194
17 E L -1.8626
18 R L -2.1219
19 A L 0.0000
20 T L -0.0729
21 I L 0.0000
22 N L -0.9189
23 C L 0.0000
24 R L -1.9799
25 A L 0.0000
26 S L -0.4708
27 K L -1.7687
27A S L -0.5313
27B V L 0.0000
27C D L -0.5759
27D S L 0.0355
28 Y L 1.2125
29 G L -0.4112
30 N L -1.0861
31 S L 0.0000
32 F L 0.2098
33 M L 0.0000
34 H L 0.0000
35 W L 0.0000
36 Y L 0.0000
37 Q L 0.0000
38 Q L 0.0000
39 K L -0.6590
40 P L -0.3684
41 G L -0.6917
42 Q L -1.1555
43 P L -0.2364
44 P L 0.0000
45 K L -1.2898
46 L L 0.0000
47 L L 0.0000
48 I L 0.0000
49 Y L 0.3130
50 L L 0.2936
51 A L 0.0000
52 S L -0.3861
53 N L -0.8307
54 L L 0.4357
55 E L -0.2022
56 S L -0.3492
57 G L -0.5052
58 V L 0.0000
59 P L -0.4309
60 D L -1.8675
61 R L -0.6482
62 F L 0.0000
63 S L -0.1771
64 G L -0.1560
65 S L -0.2922
66 G L -0.4547
67 S L -0.2950
68 G L -0.1381
69 T L -0.2477
70 D L -1.4366
71 F L 0.0000
72 T L -0.1275
73 L L 0.0000
74 T L -0.0251
75 I L 0.0000
76 S L -0.3242
77 S L -0.4933
78 L L 0.0000
79 Q L -0.4755
80 A L -0.3687
81 E L -1.6613
82 D L 0.0000
83 V L 0.0000
84 A L 0.0000
85 V L 0.2724
86 Y L 0.0000
87 Y L 0.0000
88 C L 0.0000
89 Q L 0.0000
90 Q L 0.0000
91 N L -0.2463
92 N L -0.6009
93 E L -2.1956
94 D L -2.1283
95 P L 0.0000
96 R L 0.0000
97 T L 0.0256
98 F L 0.1884
99 G L 0.0000
100 G L -0.4768
101 G L -0.1426
102 T L 0.0000
103 K L -0.2368
104 V L 0.0000
105 E L -0.3234
106 I L 0.0000
107 K L -1.3563
108 R L -0.8199
109 T L 0.0963
110 V L 1.4658
111 A L 0.2828
112 A L 0.0036
113 P L 0.0000
114 S L -0.1830
115 V L 0.0000
116 F L 0.0000
117 I L 0.0000
118 F L 0.0000
119 P L 0.0000
120 P L 0.0000
121 S L 0.0000
122 D L -2.0876
123 E L -1.9860
124 Q L 0.0000
125 L L -0.1008
126 K L -1.7013
127 S L -0.5608
128 G L -0.3654
129 T L -0.1521
130 A L 0.0000
131 S L 0.0000
132 V L 0.0000
133 V L 0.0000
134 C L 0.0000
135 L L 0.0000
136 L L 0.0000
137 N L 0.0000
138 N L -0.5278
139 F L 0.0000
140 Y L 0.0000
141 P L -0.3759
142 R L -2.1836
143 E L -2.1527
144 A L -0.6356
145 K L -1.6969
146 V L 0.0000
147 Q L -0.2007
148 W L 0.0000
149 K L -0.1330
150 V L 0.0000
151 D L -0.9995
152 N L -1.4108
153 A L 0.1038
154 L L 1.4777
155 Q L 0.0127
156 S L -0.3395
157 G L -0.7011
158 N L -1.1887
159 S L -0.3278
160 Q L -0.5238
161 E L -1.5946
162 S L -0.2593
163 V L 0.2725
164 T L -0.2369
165 E L -1.5183
166 Q L 0.0000
167 D L -0.6280
168 S L -0.8030
169 K L -1.8313
170 D L -0.8546
171 S L 0.0000
172 T L 0.0000
173 Y L 0.0000
174 S L 0.0000
175 L L 0.0000
176 S L 0.0000
177 S L 0.0000
178 T L -0.0082
179 L L 0.0000
180 T L 0.0141
181 L L 0.1239
182 S L -0.2167
183 K L -0.7112
184 A L -0.3063
185 D L -1.3351
186 Y L 0.0000
187 E L -1.7461
188 K L -2.0238
189 H L -0.9236
190 K L -1.3907
191 V L 0.1299
192 Y L 0.0000
193 A L 0.0000
194 C L 0.0000
195 E L -0.3806
196 V L 0.0000
197 T L -0.0778
198 H L 0.0000
199 Q L -1.2287
200 G L -0.3348
201 L L 0.1805
202 S L -0.2059
203 S L -0.2935
204 P L -0.2030
205 V L 0.3903
206 T L -0.1295
207 K L -0.6910
208 S L -0.2785
209 F L 0.0000
210 N L -0.1390
211 R L -0.6581
212 G L -0.8940
213 E L -1.7726
214 C L 0.3857
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Laboratory of Theory of Biopolymers 2018