| Chain sequence(s) |
H: QVTLRESGPGLVKPTQTLSLTCTVSGFSLSAYSVNWIRQPPGKALEWLAMIWGDGKIVYNSALKSRLTISKDTSKNQVSLTMTNMDPADTATYYCAGDAYYPYAMDNWGQGSTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK
L: DIQMTQSPDSLSVSLGERATINCRASKSVDSYGNSFMHWYQQKPGQPPKLLIYLASNLESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQNNEDPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | AV85H |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.276366 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:02:45)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:52)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:54)
[INFO] Main: Simulation completed successfully. (00:06:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.1121 | |
| 2 | V | H | 0.2218 | |
| 3 | T | H | 0.0564 | |
| 4 | L | H | 0.0000 | |
| 5 | R | H | -1.6009 | |
| 6 | E | H | -0.5435 | |
| 7 | S | H | -0.3056 | |
| 8 | G | H | -0.3421 | |
| 9 | P | H | -0.1803 | |
| 10 | G | H | -0.0517 | |
| 11 | L | H | 0.2921 | |
| 12 | V | H | 0.0000 | |
| 13 | K | H | -1.7099 | |
| 14 | P | H | -0.3717 | |
| 15 | T | H | -0.5064 | |
| 16 | Q | H | -1.1548 | |
| 17 | T | H | -0.2651 | |
| 18 | L | H | 0.0000 | |
| 19 | S | H | -0.2111 | |
| 20 | L | H | 0.0000 | |
| 21 | T | H | -0.0263 | |
| 22 | C | H | 0.0000 | |
| 23 | T | H | -0.0631 | |
| 24 | V | H | 0.0000 | |
| 25 | S | H | -0.1670 | |
| 26 | G | H | -0.3091 | |
| 27 | F | H | 0.4792 | |
| 28 | S | H | -0.0671 | |
| 29 | L | H | 0.0000 | |
| 30 | S | H | -0.2088 | |
| 31 | A | H | 0.0131 | |
| 32 | Y | H | 0.0000 | |
| 33 | S | H | 0.0000 | |
| 34 | V | H | 0.0000 | |
| 35 | N | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | I | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.1483 | |
| 40 | P | H | -0.1080 | |
| 41 | P | H | -0.3455 | |
| 42 | G | H | -0.8195 | |
| 43 | K | H | -1.7809 | |
| 44 | A | H | -0.2853 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.5131 | |
| 47 | W | H | 0.0000 | |
| 48 | L | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | M | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | W | H | 0.2023 | |
| 53 | G | H | -0.3542 | |
| 54 | D | H | -1.8483 | |
| 55 | G | H | -0.9027 | |
| 56 | K | H | -1.5499 | |
| 57 | I | H | 0.8058 | |
| 58 | V | H | 0.0000 | |
| 59 | Y | H | 0.1811 | |
| 60 | N | H | -0.1459 | |
| 61 | S | H | -0.1895 | |
| 62 | A | H | 0.0579 | |
| 63 | L | H | -0.1297 | |
| 64 | K | H | -1.7081 | |
| 65 | S | H | -0.5784 | |
| 66 | R | H | -0.3744 | |
| 67 | L | H | 0.0000 | |
| 68 | T | H | -0.0549 | |
| 69 | I | H | 0.0000 | |
| 70 | S | H | -0.2048 | |
| 71 | K | H | -0.5572 | |
| 72 | D | H | -0.8161 | |
| 73 | T | H | -0.2664 | |
| 74 | S | H | -0.5329 | |
| 75 | K | H | -1.7763 | |
| 76 | N | H | -0.5925 | |
| 77 | Q | H | -0.4166 | |
| 78 | V | H | 0.0000 | |
| 79 | S | H | -0.0962 | |
| 80 | L | H | 0.0000 | |
| 81 | T | H | -0.0474 | |
| 82 | M | H | 0.0000 | |
| 82A | T | H | -0.2574 | |
| 82B | N | H | -1.2890 | |
| 82C | M | H | 0.0000 | |
| 83 | D | H | -1.1355 | |
| 84 | P | H | -0.1392 | |
| 85 | V | H | 1.7286 | mutated: AV85H |
| 86 | D | H | 0.0000 | |
| 87 | T | H | -0.0104 | |
| 88 | A | H | 0.0000 | |
| 89 | T | H | -0.0143 | |
| 90 | Y | H | 0.0000 | |
| 91 | Y | H | 0.0000 | |
| 92 | C | H | 0.0000 | |
| 93 | A | H | 0.0000 | |
| 94 | G | H | 0.0000 | |
| 95 | D | H | 0.0000 | |
| 96 | A | H | 0.2542 | |
| 97 | Y | H | 1.5535 | |
| 98 | Y | H | 1.6202 | |
| 99 | P | H | 0.0000 | |
| 100 | Y | H | 0.7094 | |
| 100A | A | H | 0.0000 | |
| 100B | M | H | 0.0000 | |
| 101 | D | H | -1.0799 | |
| 102 | N | H | -0.3534 | |
| 103 | W | H | 0.0827 | |
| 104 | G | H | 0.0000 | |
| 105 | Q | H | -1.2181 | |
| 106 | G | H | -0.3337 | |
| 107 | S | H | -0.0527 | |
| 108 | T | H | -0.0217 | |
| 109 | V | H | 0.0000 | |
| 110 | T | H | 0.0000 | |
| 111 | V | H | 0.0000 | |
| 112 | S | H | -0.0724 | |
| 113 | S | H | -0.2125 | |
| 114 | A | H | -0.0396 | |
| 115 | S | H | -0.2113 | |
| 116 | T | H | -0.2132 | |
| 117 | K | H | -0.8293 | |
| 118 | G | H | -0.2687 | |
| 119 | P | H | -0.0645 | |
| 120 | S | H | -0.0550 | |
| 121 | V | H | 0.1694 | |
| 122 | F | H | 0.0000 | |
| 123 | P | H | -0.0331 | |
| 124 | L | H | 0.0000 | |
| 125 | A | H | 0.0000 | |
| 126 | P | H | 0.0000 | |
| 127 | C | H | 0.1192 | |
| 128 | S | H | -0.2858 | |
| 129 | R | H | -0.6206 | |
| 130 | S | H | -0.2823 | |
| 131 | T | H | -0.1385 | |
| 132 | S | H | -0.3898 | |
| 133 | E | H | -0.9963 | |
| 134 | S | H | -0.3856 | |
| 135 | T | H | -0.1042 | |
| 136 | A | H | 0.0000 | |
| 137 | A | H | 0.0000 | |
| 138 | L | H | 0.0000 | |
| 139 | G | H | 0.0000 | |
| 140 | C | H | 0.0000 | |
| 141 | L | H | 0.0000 | |
| 142 | V | H | 0.0000 | |
| 143 | K | H | 0.0000 | |
| 144 | D | H | -0.3140 | |
| 145 | Y | H | 0.0000 | |
| 146 | F | H | 0.0000 | |
| 147 | P | H | 0.0000 | |
| 148 | E | H | -0.3088 | |
| 149 | P | H | -0.2027 | |
| 150 | V | H | 0.1331 | |
| 151 | T | H | -0.0022 | |
| 152 | V | H | 0.1780 | |
| 153 | S | H | -0.0222 | |
| 154 | W | H | 0.0000 | |
| 155 | N | H | -0.2523 | |
| 156 | S | H | -0.3366 | |
| 157 | G | H | -0.4944 | |
| 158 | A | H | 0.0162 | |
| 159 | L | H | 0.2264 | |
| 160 | T | H | -0.0673 | |
| 161 | S | H | -0.2741 | |
| 162 | G | H | -0.2433 | |
| 163 | V | H | 0.2870 | |
| 164 | H | H | -0.0472 | |
| 165 | T | H | -0.0498 | |
| 166 | F | H | 0.0000 | |
| 167 | P | H | -0.2153 | |
| 168 | A | H | 0.0450 | |
| 169 | V | H | 0.5829 | |
| 170 | L | H | 1.3140 | |
| 171 | Q | H | 0.0485 | |
| 172 | S | H | -0.2767 | |
| 173 | S | H | -0.2933 | |
| 174 | G | H | -0.2220 | |
| 175 | L | H | 0.2338 | |
| 176 | Y | H | 0.3663 | |
| 177 | S | H | 0.0000 | |
| 178 | L | H | 0.0000 | |
| 179 | S | H | 0.0000 | |
| 180 | S | H | 0.0000 | |
| 181 | V | H | 0.0000 | |
| 182 | V | H | 0.0000 | |
| 183 | T | H | -0.0095 | |
| 184 | V | H | 0.0000 | |
| 185 | P | H | -0.2751 | |
| 186 | S | H | -0.1724 | |
| 187 | S | H | -0.2337 | |
| 188 | S | H | -0.0068 | |
| 189 | L | H | 0.2445 | |
| 190 | G | H | -0.4178 | |
| 191 | T | H | -0.3874 | |
| 192 | K | H | -1.3487 | |
| 193 | T | H | -0.2692 | |
| 194 | Y | H | 0.0000 | |
| 195 | T | H | -0.3076 | |
| 196 | C | H | 0.0000 | |
| 197 | N | H | -0.3924 | |
| 198 | V | H | 0.0000 | |
| 199 | D | H | -0.6491 | |
| 200 | H | H | 0.0000 | |
| 201 | K | H | -1.8665 | |
| 202 | P | H | -0.3667 | |
| 203 | S | H | -0.3003 | |
| 204 | N | H | -1.4969 | |
| 205 | T | H | -0.5508 | |
| 206 | K | H | -1.6906 | |
| 207 | V | H | -0.2678 | |
| 208 | D | H | -1.7879 | |
| 209 | K | H | -0.9161 | |
| 210 | R | H | -1.8917 | |
| 211 | V | H | 0.0000 | |
| 212 | E | H | -1.8270 | |
| 213 | S | H | -0.6698 | |
| 214 | K | H | -1.7068 | |
| 1 | D | L | -1.7894 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.1675 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.0931 | |
| 6 | Q | L | -0.1700 | |
| 7 | S | L | -0.2564 | |
| 8 | P | L | -0.5186 | |
| 9 | D | L | -1.8323 | |
| 10 | S | L | -0.4209 | |
| 11 | L | L | 0.1321 | |
| 12 | S | L | -0.1532 | |
| 13 | V | L | 0.1529 | |
| 14 | S | L | 0.0380 | |
| 15 | L | L | 1.3741 | |
| 16 | G | L | -0.4194 | |
| 17 | E | L | -1.8626 | |
| 18 | R | L | -2.1219 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.0729 | |
| 21 | I | L | 0.0000 | |
| 22 | N | L | -0.9189 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.9799 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.4708 | |
| 27 | K | L | -1.7687 | |
| 27A | S | L | -0.5313 | |
| 27B | V | L | 0.0000 | |
| 27C | D | L | -0.5759 | |
| 27D | S | L | 0.0355 | |
| 28 | Y | L | 1.2125 | |
| 29 | G | L | -0.4112 | |
| 30 | N | L | -1.0861 | |
| 31 | S | L | 0.0000 | |
| 32 | F | L | 0.2098 | |
| 33 | M | L | 0.0000 | |
| 34 | H | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | 0.0000 | |
| 39 | K | L | -0.6590 | |
| 40 | P | L | -0.3684 | |
| 41 | G | L | -0.6917 | |
| 42 | Q | L | -1.1555 | |
| 43 | P | L | -0.2364 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -1.2898 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | 0.3130 | |
| 50 | L | L | 0.2936 | |
| 51 | A | L | 0.0000 | |
| 52 | S | L | -0.3861 | |
| 53 | N | L | -0.8307 | |
| 54 | L | L | 0.4357 | |
| 55 | E | L | -0.2022 | |
| 56 | S | L | -0.3492 | |
| 57 | G | L | -0.5052 | |
| 58 | V | L | 0.0000 | |
| 59 | P | L | -0.4309 | |
| 60 | D | L | -1.8675 | |
| 61 | R | L | -0.6482 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.1771 | |
| 64 | G | L | -0.1560 | |
| 65 | S | L | -0.2922 | |
| 66 | G | L | -0.4547 | |
| 67 | S | L | -0.2950 | |
| 68 | G | L | -0.1381 | |
| 69 | T | L | -0.2477 | |
| 70 | D | L | -1.4366 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -0.1275 | |
| 73 | L | L | 0.0000 | |
| 74 | T | L | -0.0251 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -0.3242 | |
| 77 | S | L | -0.4933 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -0.4755 | |
| 80 | A | L | -0.3687 | |
| 81 | E | L | -1.6613 | |
| 82 | D | L | 0.0000 | |
| 83 | V | L | 0.0000 | |
| 84 | A | L | 0.0000 | |
| 85 | V | L | 0.2724 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | N | L | -0.2463 | |
| 92 | N | L | -0.6009 | |
| 93 | E | L | -2.1956 | |
| 94 | D | L | -2.1283 | |
| 95 | P | L | 0.0000 | |
| 96 | R | L | 0.0000 | |
| 97 | T | L | 0.0256 | |
| 98 | F | L | 0.1884 | |
| 99 | G | L | 0.0000 | |
| 100 | G | L | -0.4768 | |
| 101 | G | L | -0.1426 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -0.2368 | |
| 104 | V | L | 0.0000 | |
| 105 | E | L | -0.3234 | |
| 106 | I | L | 0.0000 | |
| 107 | K | L | -1.3563 | |
| 108 | R | L | -0.8199 | |
| 109 | T | L | 0.0963 | |
| 110 | V | L | 1.4658 | |
| 111 | A | L | 0.2828 | |
| 112 | A | L | 0.0036 | |
| 113 | P | L | 0.0000 | |
| 114 | S | L | -0.1830 | |
| 115 | V | L | 0.0000 | |
| 116 | F | L | 0.0000 | |
| 117 | I | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | P | L | 0.0000 | |
| 120 | P | L | 0.0000 | |
| 121 | S | L | 0.0000 | |
| 122 | D | L | -2.0876 | |
| 123 | E | L | -1.9860 | |
| 124 | Q | L | 0.0000 | |
| 125 | L | L | -0.1008 | |
| 126 | K | L | -1.7013 | |
| 127 | S | L | -0.5608 | |
| 128 | G | L | -0.3654 | |
| 129 | T | L | -0.1521 | |
| 130 | A | L | 0.0000 | |
| 131 | S | L | 0.0000 | |
| 132 | V | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | C | L | 0.0000 | |
| 135 | L | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | N | L | 0.0000 | |
| 138 | N | L | -0.5278 | |
| 139 | F | L | 0.0000 | |
| 140 | Y | L | 0.0000 | |
| 141 | P | L | -0.3759 | |
| 142 | R | L | -2.1836 | |
| 143 | E | L | -2.1527 | |
| 144 | A | L | -0.6356 | |
| 145 | K | L | -1.6969 | |
| 146 | V | L | 0.0000 | |
| 147 | Q | L | -0.2007 | |
| 148 | W | L | 0.0000 | |
| 149 | K | L | -0.1330 | |
| 150 | V | L | 0.0000 | |
| 151 | D | L | -0.9995 | |
| 152 | N | L | -1.4108 | |
| 153 | A | L | 0.1038 | |
| 154 | L | L | 1.4777 | |
| 155 | Q | L | 0.0127 | |
| 156 | S | L | -0.3395 | |
| 157 | G | L | -0.7011 | |
| 158 | N | L | -1.1887 | |
| 159 | S | L | -0.3278 | |
| 160 | Q | L | -0.5238 | |
| 161 | E | L | -1.5946 | |
| 162 | S | L | -0.2593 | |
| 163 | V | L | 0.2725 | |
| 164 | T | L | -0.2369 | |
| 165 | E | L | -1.5183 | |
| 166 | Q | L | 0.0000 | |
| 167 | D | L | -0.6280 | |
| 168 | S | L | -0.8030 | |
| 169 | K | L | -1.8313 | |
| 170 | D | L | -0.8546 | |
| 171 | S | L | 0.0000 | |
| 172 | T | L | 0.0000 | |
| 173 | Y | L | 0.0000 | |
| 174 | S | L | 0.0000 | |
| 175 | L | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | -0.0082 | |
| 179 | L | L | 0.0000 | |
| 180 | T | L | 0.0141 | |
| 181 | L | L | 0.1239 | |
| 182 | S | L | -0.2167 | |
| 183 | K | L | -0.7112 | |
| 184 | A | L | -0.3063 | |
| 185 | D | L | -1.3351 | |
| 186 | Y | L | 0.0000 | |
| 187 | E | L | -1.7461 | |
| 188 | K | L | -2.0238 | |
| 189 | H | L | -0.9236 | |
| 190 | K | L | -1.3907 | |
| 191 | V | L | 0.1299 | |
| 192 | Y | L | 0.0000 | |
| 193 | A | L | 0.0000 | |
| 194 | C | L | 0.0000 | |
| 195 | E | L | -0.3806 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -0.0778 | |
| 198 | H | L | 0.0000 | |
| 199 | Q | L | -1.2287 | |
| 200 | G | L | -0.3348 | |
| 201 | L | L | 0.1805 | |
| 202 | S | L | -0.2059 | |
| 203 | S | L | -0.2935 | |
| 204 | P | L | -0.2030 | |
| 205 | V | L | 0.3903 | |
| 206 | T | L | -0.1295 | |
| 207 | K | L | -0.6910 | |
| 208 | S | L | -0.2785 | |
| 209 | F | L | 0.0000 | |
| 210 | N | L | -0.1390 | |
| 211 | R | L | -0.6581 | |
| 212 | G | L | -0.8940 | |
| 213 | E | L | -1.7726 | |
| 214 | C | L | 0.3857 |