| Chain sequence(s) |
B: LAEVKAFVDGMKAAMKIAKRMAEVDGNKEMLEKTEEKQKKIEEKGKKILA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:47)
[INFO] Main: Simulation completed successfully. (00:02:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.1332 | |
| 2 | A | B | -0.1320 | |
| 3 | E | B | -1.2746 | |
| 4 | V | B | -0.0276 | |
| 5 | K | B | -1.2353 | |
| 6 | A | B | -0.9316 | |
| 7 | F | B | 0.2433 | |
| 8 | V | B | 0.0000 | |
| 9 | D | B | -2.3096 | |
| 10 | G | B | -1.0455 | |
| 11 | M | B | -0.8671 | |
| 12 | K | B | -1.6598 | |
| 13 | A | B | -0.7216 | |
| 14 | A | B | -0.5042 | |
| 15 | M | B | 0.0000 | |
| 16 | K | B | -1.1049 | |
| 17 | I | B | 0.5377 | |
| 18 | A | B | -0.1701 | |
| 19 | K | B | -1.8135 | |
| 20 | R | B | -1.7303 | |
| 21 | M | B | -0.4993 | |
| 22 | A | B | 0.0000 | |
| 23 | E | B | -2.3899 | |
| 24 | V | B | -0.5498 | |
| 25 | D | B | -2.2560 | |
| 26 | G | B | -2.4153 | |
| 27 | N | B | -3.1372 | |
| 28 | K | B | -4.1447 | |
| 29 | E | B | -3.8562 | |
| 30 | M | B | -3.3540 | |
| 31 | L | B | -3.9336 | |
| 32 | E | B | -4.7288 | |
| 33 | K | B | -4.6662 | |
| 34 | T | B | 0.0000 | |
| 35 | E | B | -4.6422 | |
| 36 | E | B | -5.0969 | |
| 37 | K | B | -4.9167 | |
| 38 | Q | B | -4.7584 | |
| 39 | K | B | -5.0361 | |
| 40 | K | B | -5.0487 | |
| 41 | I | B | -3.9440 | |
| 42 | E | B | -4.5798 | |
| 43 | E | B | -4.9212 | |
| 44 | K | B | -3.9138 | |
| 45 | G | B | 0.0000 | |
| 46 | K | B | -3.6635 | |
| 47 | K | B | -3.0091 | |
| 48 | I | B | -0.9333 | |
| 49 | L | B | -0.3936 | |
| 50 | A | B | -0.5659 |