Project name: query_structure

Status: done

Started: 2026-03-16 23:18:34
Settings
Chain sequence(s) A: GCKLTFWKCKNKKECCGWNACALGICMPR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:32)
Show buried residues

Minimal score value
-2.9238
Maximal score value
2.659
Average score
-0.1501
Total score value
-4.3543

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.1891
2 C A 0.5855
3 K A 0.7876
4 L A 2.3117
5 T A 1.5952
6 F A 2.6590
7 W A 1.2933
8 K A -0.9237
9 C A 0.0000
10 K A -2.8711
11 N A -2.9238
12 K A -2.6403
13 K A -2.4602
14 E A -1.5845
15 C A 0.0000
16 C A 0.8261
17 G A 0.2451
18 W A 0.2867
19 N A -0.8199
20 A A -1.3674
21 C A -0.8032
22 A A 0.1832
23 L A 1.7348
24 G A 0.3534
25 I A 0.6686
26 C A 0.0000
27 M A 1.0730
28 P A -0.5751
29 R A -1.7992
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Laboratory of Theory of Biopolymers 2018