| Chain sequence(s) |
A: GCKLTFWKCKNKKECCGWNACALGICMPR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:32)
[INFO] Main: Simulation completed successfully. (00:00:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1891 | |
| 2 | C | A | 0.5855 | |
| 3 | K | A | 0.7876 | |
| 4 | L | A | 2.3117 | |
| 5 | T | A | 1.5952 | |
| 6 | F | A | 2.6590 | |
| 7 | W | A | 1.2933 | |
| 8 | K | A | -0.9237 | |
| 9 | C | A | 0.0000 | |
| 10 | K | A | -2.8711 | |
| 11 | N | A | -2.9238 | |
| 12 | K | A | -2.6403 | |
| 13 | K | A | -2.4602 | |
| 14 | E | A | -1.5845 | |
| 15 | C | A | 0.0000 | |
| 16 | C | A | 0.8261 | |
| 17 | G | A | 0.2451 | |
| 18 | W | A | 0.2867 | |
| 19 | N | A | -0.8199 | |
| 20 | A | A | -1.3674 | |
| 21 | C | A | -0.8032 | |
| 22 | A | A | 0.1832 | |
| 23 | L | A | 1.7348 | |
| 24 | G | A | 0.3534 | |
| 25 | I | A | 0.6686 | |
| 26 | C | A | 0.0000 | |
| 27 | M | A | 1.0730 | |
| 28 | P | A | -0.5751 | |
| 29 | R | A | -1.7992 |