Project name: FFGHKGF12

Status: done

Started: 2026-05-21 14:50:05
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Chain sequence(s) A: FFGHKGF
C: FFGHKGF
B: FFGHKGF
E: FFGHKGF
D: FFGHKGF
G: FFGHKGF
F: FFGHKGF
I: FFGHKGF
H: FFGHKGF
K: FFGHKGF
J: FFGHKGF
L: FFGHKGF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:31)
Show buried residues

Minimal score value
-2.4151
Maximal score value
5.0373
Average score
0.6405
Total score value
53.8008

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 4.4228
2 F A 2.9145
3 G A 1.1031
4 H A -0.6602
5 K A -1.6375
6 G A -0.5429
7 F A 1.2175
1 F B 4.1022
2 F B 1.8445
3 G B 0.2978
4 H B -1.1649
5 K B -1.8051
6 G B -0.5620
7 F B 1.2874
1 F C 3.6279
2 F C 2.4611
3 G C 0.1388
4 H C -1.2424
5 K C -2.0156
6 G C -0.6716
7 F C 1.3217
1 F D 3.3348
2 F D 2.1723
3 G D -0.3810
4 H D -1.4913
5 K D -2.3758
6 G D -0.8045
7 F D 1.1991
1 F E 4.0946
2 F E 3.4459
3 G E 0.5988
4 H E -0.9564
5 K E -2.2166
6 G E -0.8269
7 F E 1.2438
1 F F 4.7068
2 F F 3.6548
3 G F 1.1750
4 H F -0.2893
5 K F -1.6780
6 G F -0.6972
7 F F 1.3114
1 F G 5.0373
2 F G 2.9864
3 G G 0.0000
4 H G -1.2315
5 K G -1.8971
6 G G -0.6970
7 F G 1.1443
1 F H 4.2114
2 F H 2.3297
3 G H 0.2199
4 H H -1.3781
5 K H -1.8895
6 G H -0.3169
7 F H 1.4164
1 F I 4.2256
2 F I 2.6549
3 G I 0.1108
4 H I -1.3157
5 K I -1.9700
6 G I -0.9323
7 F I 1.1327
1 F J 3.6407
2 F J 2.5590
3 G J 0.0152
4 H J -1.1205
5 K J -2.1142
6 G J -0.6270
7 F J 1.2444
1 F K 4.1702
2 F K 1.5406
3 G K -0.2409
4 H K -1.8947
5 K K -2.4151
6 G K -0.6693
7 F K 1.1404
1 F L 4.0835
2 F L 3.3462
3 G L 0.3402
4 H L -1.1909
5 K L -2.0461
6 G L -0.6314
7 F L 1.1718
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Laboratory of Theory of Biopolymers 2018