Project name: query_structure

Status: done

Started: 2026-03-16 23:26:58
Settings
Chain sequence(s) A: GLPVCGETCFGGTCNTPGCACDPWPVCTRD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:15)
Show buried residues

Minimal score value
-2.7076
Maximal score value
1.8569
Average score
-0.3974
Total score value
-11.9228

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.3403
2 L A 1.0461
3 P A -0.1583
4 V A 0.2262
5 C A -0.3873
6 G A -0.1880
7 E A -0.1337
8 T A 0.3907
9 C A 0.0000
10 F A 1.8569
11 G A 0.3687
12 G A 0.1593
13 T A -0.1339
14 C A -0.9086
15 N A -1.3770
16 T A -1.1466
17 P A -0.9667
18 G A -1.4189
19 C A -1.6272
20 A A -1.2266
21 C A -0.3972
22 D A -1.6917
23 P A -0.6551
24 W A 0.9038
25 P A 1.0216
26 V A 0.6588
27 C A 0.0000
28 T A -1.1420
29 R A -2.6288
30 D A -2.7076
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Laboratory of Theory of Biopolymers 2018