| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDYYVITYGETGGSWYGWQEFAVPGSKSTATISGLKPGVDYTITVYAYPDHHYQGRSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:35)
[INFO] Main: Simulation completed successfully. (00:00:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6666 | |
| 2 | S | A | 0.3608 | |
| 3 | D | A | -0.5150 | |
| 4 | V | A | -0.8329 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.1000 | |
| 7 | D | A | -3.3504 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1124 | |
| 10 | V | A | 0.0968 | |
| 11 | V | A | 1.5468 | |
| 12 | A | A | 0.9034 | |
| 13 | A | A | 0.3202 | |
| 14 | T | A | -0.3381 | |
| 15 | P | A | -1.1165 | |
| 16 | T | A | -0.9976 | |
| 17 | S | A | -0.5282 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7560 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1260 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.1872 | |
| 24 | A | A | -1.6231 | |
| 25 | P | A | 0.0000 | |
| 26 | A | A | 0.2553 | |
| 27 | V | A | 0.4587 | |
| 28 | T | A | -0.5354 | |
| 29 | V | A | -1.1797 | |
| 30 | D | A | -2.4538 | |
| 31 | Y | A | -1.2277 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.0671 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.6514 | |
| 39 | T | A | -1.1980 | |
| 40 | G | A | -0.8320 | |
| 41 | G | A | -0.5768 | |
| 42 | S | A | 0.3548 | |
| 43 | W | A | 1.3109 | |
| 44 | Y | A | 1.5228 | |
| 45 | G | A | 0.2916 | |
| 46 | W | A | -0.2367 | |
| 47 | Q | A | -1.2855 | |
| 48 | E | A | -1.8294 | |
| 49 | F | A | -0.4415 | |
| 50 | A | A | 0.0753 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.0193 | |
| 53 | G | A | -1.2898 | |
| 54 | S | A | -1.3419 | |
| 55 | K | A | -2.1242 | |
| 56 | S | A | -1.3687 | |
| 57 | T | A | -0.7445 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2404 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6604 | |
| 62 | G | A | -1.0297 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3927 | |
| 65 | P | A | -1.6599 | |
| 66 | G | A | -1.4580 | |
| 67 | V | A | -1.4755 | |
| 68 | D | A | -2.1680 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -1.0587 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | -0.0883 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | 0.0000 | |
| 77 | P | A | -1.9722 | |
| 78 | D | A | -2.9903 | |
| 79 | H | A | -2.4297 | |
| 80 | H | A | -1.9038 | |
| 81 | Y | A | -0.7348 | |
| 82 | Q | A | -1.8999 | |
| 83 | G | A | -1.7459 | |
| 84 | R | A | -2.0008 | |
| 85 | S | A | -1.2195 | |
| 86 | P | A | -0.7197 | |
| 87 | I | A | -0.4753 | |
| 88 | S | A | -0.6992 | |
| 89 | I | A | -0.7631 | |
| 90 | N | A | -1.7817 | |
| 91 | Y | A | -1.5283 | |
| 92 | R | A | -2.5710 | |
| 93 | T | A | -1.6498 |