Project name: 16599465c38641

Status: done

Started: 2026-03-30 04:24:40
Settings
Chain sequence(s) H: QVQLVQSGGGVVQPGRSLRLSCKASGYTFTRYTMHWVRQAPGKGLEWIGYINPSRGYTNYNQKVKDRFTISRDNSKNTAFLQMDSLRPEDTGVYFCARYYDDHYCLDYWGQGTPVTVSS
L: DIQMTQSPSSLSASVGDRVTITCSASSSVSYMNWYQQTPGKAPKRWIYDTSKLASGVPSRFSGSGSGTDYTFTISSLQPEDIATYYCQQWSSNPFTFGQGTKLQIT
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:22)
Show buried residues

Minimal score value
-3.0038
Maximal score value
1.3689
Average score
-0.6621
Total score value
-148.9677

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4935
2 V H -0.8897
3 Q H -1.4050
4 L H 0.0000
5 V H -0.0932
6 Q H 0.0000
7 S H -0.6824
8 G H -0.6237
9 G H -0.3257
11 G H 0.3803
12 V H 1.3689
13 V H 0.0000
14 Q H -1.2618
15 P H -1.7294
16 G H -2.1190
17 R H -2.6776
18 S H -1.7352
19 L H -0.9897
20 R H -1.2167
21 L H 0.0000
22 S H -0.5316
23 C H 0.0000
24 K H -1.5258
25 A H 0.0000
26 S H -1.0338
27 G H -1.0444
28 Y H -0.6976
29 T H -0.6516
30 F H 0.0000
35 T H -1.4212
36 R H -2.0263
37 Y H -1.0884
38 T H -0.6710
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7061
45 A H -1.1678
46 P H -0.9811
47 G H -1.4570
48 K H -2.3645
49 G H -1.6217
50 L H 0.0000
51 E H -0.9415
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Y H 0.0900
56 I H 0.0000
57 N H -1.1131
58 P H 0.0000
59 S H -1.6421
62 R H -2.0418
63 G H -1.2361
64 Y H -0.4072
65 T H -0.1970
66 N H -0.4768
67 Y H -1.2583
68 N H -2.0700
69 Q H -3.0038
70 K H -2.8883
71 V H 0.0000
72 K H -2.7998
74 D H -2.9051
75 R H -1.8712
76 F H 0.0000
77 T H -0.8655
78 I H 0.0000
79 S H -0.2480
80 R H -1.0365
81 D H -1.5871
82 N H -1.6293
83 S H -1.5690
84 K H -2.5392
85 N H -2.0176
86 T H -1.4601
87 A H 0.0000
88 F H -0.3341
89 L H 0.0000
90 Q H -0.7461
91 M H 0.0000
92 D H -1.9209
93 S H -1.8789
94 L H 0.0000
95 R H -2.6798
96 P H -1.9597
97 E H -2.3823
98 D H 0.0000
99 T H -0.7341
100 G H 0.0000
101 V H 0.1968
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 Y H 0.0000
108 Y H -1.0394
109 D H -2.5470
110 D H -2.4711
112 H H -1.2520
113 Y H -0.1043
114 C H 0.0000
115 L H 0.0000
116 D H -0.0785
117 Y H 0.2680
118 W H -0.2312
119 G H 0.0000
120 Q H -1.3801
121 G H 0.0000
122 T H 0.0000
123 P H -0.1154
124 V H 0.0000
125 T H -0.0110
126 V H 0.0000
127 S H -0.3681
128 S H -0.4862
1 D L -2.5223
2 I L 0.0000
3 Q L -1.8591
4 M L 0.0000
5 T L -0.9061
6 Q L 0.0000
7 S L -0.6093
8 P L -0.6425
9 S L -0.9394
10 S L -0.8900
11 L L -0.3911
12 S L -0.1939
13 A L -0.3550
14 S L -0.0998
15 V L 0.5995
16 G L -0.6709
17 D L -1.6307
18 R L -2.2770
19 V L 0.0000
20 T L -0.6311
21 I L 0.0000
22 T L -0.4650
23 C L 0.0000
24 S L -0.9916
25 A L 0.0000
26 S L -1.1428
27 S L -0.9769
28 S L -0.6517
29 V L 0.0000
37 S L -0.0747
38 Y L 0.5067
39 M L 0.0000
40 N L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.9566
45 T L -1.0813
46 P L -0.8861
47 G L -1.5513
48 K L -2.3851
49 A L -1.3838
50 P L 0.0000
51 K L -1.0436
52 R L -0.4346
53 W L -0.3275
54 I L 0.0000
55 Y L 0.1004
56 D L 0.0000
57 T L 0.0000
65 S L -0.4845
66 K L -0.6857
67 L L -0.0528
68 A L 0.0000
69 S L -0.4065
70 G L -0.4324
71 V L -0.2837
72 P L -0.2532
74 S L -0.3590
75 R L -0.7303
76 F L 0.0000
77 S L -0.4046
78 G L -0.4097
79 S L -0.6917
80 G L -0.8453
83 S L -0.8098
84 G L -0.8136
85 T L -0.9949
86 D L -1.6123
87 Y L 0.0000
88 T L -0.5640
89 F L 0.0000
90 T L -0.5798
91 I L 0.0000
92 S L -1.2421
93 S L -1.1829
94 L L 0.0000
95 Q L -0.6940
96 P L -0.6972
97 E L -1.7025
98 D L 0.0000
99 I L -0.0871
100 A L 0.0000
101 T L -0.7621
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 W L 0.1688
108 S L -0.1198
109 S L -0.9768
114 N L -1.6195
115 P L -1.5364
116 F L -0.6685
117 T L -0.8893
118 F L 0.0000
119 G L 0.0000
120 Q L -1.9506
121 G L 0.0000
122 T L 0.0000
123 K L -1.5896
124 L L 0.0000
125 Q L -0.2859
126 I L 0.3209
127 T L 0.1780
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Laboratory of Theory of Biopolymers 2018