| Chain sequence(s) |
H: QVQLVQSGGGVVQPGRSLRLSCKASGYTFTRYTMHWVRQAPGKGLEWIGYINPSRGYTNYNQKVKDRFTISRDNSKNTAFLQMDSLRPEDTGVYFCARYYDDHYCLDYWGQGTPVTVSS
L: DIQMTQSPSSLSASVGDRVTITCSASSSVSYMNWYQQTPGKAPKRWIYDTSKLASGVPSRFSGSGSGTDYTFTISSLQPEDIATYYCQQWSSNPFTFGQGTKLQIT input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4935 | |
| 2 | V | H | -0.8897 | |
| 3 | Q | H | -1.4050 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | -0.0932 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.6824 | |
| 8 | G | H | -0.6237 | |
| 9 | G | H | -0.3257 | |
| 11 | G | H | 0.3803 | |
| 12 | V | H | 1.3689 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.2618 | |
| 15 | P | H | -1.7294 | |
| 16 | G | H | -2.1190 | |
| 17 | R | H | -2.6776 | |
| 18 | S | H | -1.7352 | |
| 19 | L | H | -0.9897 | |
| 20 | R | H | -1.2167 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.5316 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.5258 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0338 | |
| 27 | G | H | -1.0444 | |
| 28 | Y | H | -0.6976 | |
| 29 | T | H | -0.6516 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.4212 | |
| 36 | R | H | -2.0263 | |
| 37 | Y | H | -1.0884 | |
| 38 | T | H | -0.6710 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7061 | |
| 45 | A | H | -1.1678 | |
| 46 | P | H | -0.9811 | |
| 47 | G | H | -1.4570 | |
| 48 | K | H | -2.3645 | |
| 49 | G | H | -1.6217 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9415 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Y | H | 0.0900 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -1.1131 | |
| 58 | P | H | 0.0000 | |
| 59 | S | H | -1.6421 | |
| 62 | R | H | -2.0418 | |
| 63 | G | H | -1.2361 | |
| 64 | Y | H | -0.4072 | |
| 65 | T | H | -0.1970 | |
| 66 | N | H | -0.4768 | |
| 67 | Y | H | -1.2583 | |
| 68 | N | H | -2.0700 | |
| 69 | Q | H | -3.0038 | |
| 70 | K | H | -2.8883 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.7998 | |
| 74 | D | H | -2.9051 | |
| 75 | R | H | -1.8712 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8655 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2480 | |
| 80 | R | H | -1.0365 | |
| 81 | D | H | -1.5871 | |
| 82 | N | H | -1.6293 | |
| 83 | S | H | -1.5690 | |
| 84 | K | H | -2.5392 | |
| 85 | N | H | -2.0176 | |
| 86 | T | H | -1.4601 | |
| 87 | A | H | 0.0000 | |
| 88 | F | H | -0.3341 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7461 | |
| 91 | M | H | 0.0000 | |
| 92 | D | H | -1.9209 | |
| 93 | S | H | -1.8789 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.6798 | |
| 96 | P | H | -1.9597 | |
| 97 | E | H | -2.3823 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7341 | |
| 100 | G | H | 0.0000 | |
| 101 | V | H | 0.1968 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | Y | H | 0.0000 | |
| 108 | Y | H | -1.0394 | |
| 109 | D | H | -2.5470 | |
| 110 | D | H | -2.4711 | |
| 112 | H | H | -1.2520 | |
| 113 | Y | H | -0.1043 | |
| 114 | C | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.0785 | |
| 117 | Y | H | 0.2680 | |
| 118 | W | H | -0.2312 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.3801 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | P | H | -0.1154 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0110 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.3681 | |
| 128 | S | H | -0.4862 | |
| 1 | D | L | -2.5223 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.8591 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.9061 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6093 | |
| 8 | P | L | -0.6425 | |
| 9 | S | L | -0.9394 | |
| 10 | S | L | -0.8900 | |
| 11 | L | L | -0.3911 | |
| 12 | S | L | -0.1939 | |
| 13 | A | L | -0.3550 | |
| 14 | S | L | -0.0998 | |
| 15 | V | L | 0.5995 | |
| 16 | G | L | -0.6709 | |
| 17 | D | L | -1.6307 | |
| 18 | R | L | -2.2770 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6311 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.4650 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.9916 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.1428 | |
| 27 | S | L | -0.9769 | |
| 28 | S | L | -0.6517 | |
| 29 | V | L | 0.0000 | |
| 37 | S | L | -0.0747 | |
| 38 | Y | L | 0.5067 | |
| 39 | M | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.9566 | |
| 45 | T | L | -1.0813 | |
| 46 | P | L | -0.8861 | |
| 47 | G | L | -1.5513 | |
| 48 | K | L | -2.3851 | |
| 49 | A | L | -1.3838 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0436 | |
| 52 | R | L | -0.4346 | |
| 53 | W | L | -0.3275 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1004 | |
| 56 | D | L | 0.0000 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.4845 | |
| 66 | K | L | -0.6857 | |
| 67 | L | L | -0.0528 | |
| 68 | A | L | 0.0000 | |
| 69 | S | L | -0.4065 | |
| 70 | G | L | -0.4324 | |
| 71 | V | L | -0.2837 | |
| 72 | P | L | -0.2532 | |
| 74 | S | L | -0.3590 | |
| 75 | R | L | -0.7303 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4046 | |
| 78 | G | L | -0.4097 | |
| 79 | S | L | -0.6917 | |
| 80 | G | L | -0.8453 | |
| 83 | S | L | -0.8098 | |
| 84 | G | L | -0.8136 | |
| 85 | T | L | -0.9949 | |
| 86 | D | L | -1.6123 | |
| 87 | Y | L | 0.0000 | |
| 88 | T | L | -0.5640 | |
| 89 | F | L | 0.0000 | |
| 90 | T | L | -0.5798 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2421 | |
| 93 | S | L | -1.1829 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.6940 | |
| 96 | P | L | -0.6972 | |
| 97 | E | L | -1.7025 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.0871 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.7621 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | W | L | 0.1688 | |
| 108 | S | L | -0.1198 | |
| 109 | S | L | -0.9768 | |
| 114 | N | L | -1.6195 | |
| 115 | P | L | -1.5364 | |
| 116 | F | L | -0.6685 | |
| 117 | T | L | -0.8893 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.9506 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.5896 | |
| 124 | L | L | 0.0000 | |
| 125 | Q | L | -0.2859 | |
| 126 | I | L | 0.3209 | |
| 127 | T | L | 0.1780 |