| Chain sequence(s) |
A: GPPPLNPGPELRSTDDYVTETDLLYYAETELITEEGHPTKDIVVNGKVVIPKVSAYQYRVFLLTLPDPNKLPLPSPDFVDPATERLIWRLRAFYIGIGGPLGKGTYGHANFNALGDVDNPTAPVHETADDTQALSWRPKLKQEYIIGDEPPLGKYTTIAKPEPGLPPGAKPPLETKTSIIQHGDMADIGFGAKDYAKLLPRKNDVPDIILNTTTKVVDYEGMLAEPYGRRMFTHNEKESSKASKNLRRDGPVLNPLPAAPPPSKLYTPPSPESPYAVLPSYDYFTLPDEGEITEEDLLFNKPVFLEKAPGLNNGVLWGNRLYITVLDNTRAEIETIETRISTPEEDVYNPDNYVTSKRYKREYQLELIVQLCRIPLTPETLAELARLDPSILVDSNLPDIPPVTRPDPLAGLKFHEIDLTDKLSTDLSKSPLGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6880 | |
| 2 | P | A | -0.4227 | |
| 3 | P | A | -0.4111 | |
| 4 | P | A | -0.1504 | |
| 5 | L | A | 0.5848 | |
| 6 | N | A | -0.9406 | |
| 7 | P | A | -1.1021 | |
| 8 | G | A | -1.1871 | |
| 9 | P | A | -1.4905 | |
| 10 | E | A | -1.9417 | |
| 11 | L | A | -0.8153 | |
| 12 | R | A | -1.3331 | |
| 13 | S | A | -1.2723 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.5547 | |
| 16 | D | A | -2.5300 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -1.3428 | |
| 20 | E | A | -1.8076 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.8232 | |
| 23 | L | A | -0.5724 | |
| 24 | L | A | -0.2123 | |
| 25 | Y | A | -0.0654 | |
| 26 | Y | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.0082 | |
| 29 | T | A | 0.0000 | |
| 30 | E | A | -1.3621 | |
| 31 | L | A | 0.3326 | |
| 32 | I | A | 0.0000 | |
| 33 | T | A | -0.7909 | |
| 34 | E | A | -1.4986 | |
| 35 | E | A | -2.3773 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.9126 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5265 | |
| 40 | K | A | -2.0363 | |
| 41 | D | A | -0.8301 | |
| 42 | I | A | 1.1912 | |
| 43 | V | A | 2.1873 | |
| 44 | V | A | 1.7292 | |
| 45 | N | A | -0.5170 | |
| 46 | G | A | -0.3714 | |
| 47 | K | A | -0.1502 | |
| 48 | V | A | 1.8758 | |
| 49 | V | A | 2.4512 | |
| 50 | I | A | 0.9824 | |
| 51 | P | A | -0.3540 | |
| 52 | K | A | -1.3440 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.4307 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.5882 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.9472 | |
| 70 | K | A | -2.0815 | |
| 71 | L | A | -0.9178 | |
| 72 | P | A | -0.4803 | |
| 73 | L | A | -0.2438 | |
| 74 | P | A | -0.2989 | |
| 75 | S | A | -0.7156 | |
| 76 | P | A | -1.2588 | |
| 77 | D | A | -2.1611 | |
| 78 | F | A | -1.0785 | |
| 79 | V | A | 0.0000 | |
| 80 | D | A | -2.1806 | |
| 81 | P | A | -1.4312 | |
| 82 | A | A | -0.7328 | |
| 83 | T | A | -0.8119 | |
| 84 | E | A | -1.2244 | |
| 85 | R | A | -1.1623 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.5573 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | Y | A | -0.3139 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | G | A | -0.5556 | |
| 99 | G | A | -0.9653 | |
| 100 | P | A | -0.5866 | |
| 101 | L | A | -0.3895 | |
| 102 | G | A | -0.8703 | |
| 103 | K | A | -1.5386 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.7361 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.6643 | |
| 108 | H | A | -1.1114 | |
| 109 | A | A | -0.9719 | |
| 110 | N | A | -2.1409 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.1665 | |
| 116 | D | A | -1.9035 | |
| 117 | V | A | -1.5263 | |
| 118 | D | A | -2.9762 | |
| 119 | N | A | -2.5876 | |
| 120 | P | A | -1.4607 | |
| 121 | T | A | -0.7652 | |
| 122 | A | A | -0.2533 | |
| 123 | P | A | 0.3774 | |
| 124 | V | A | -0.0551 | |
| 125 | H | A | -0.9172 | |
| 126 | E | A | -1.8194 | |
| 127 | T | A | -1.5346 | |
| 128 | A | A | -1.2041 | |
| 129 | D | A | -2.4588 | |
| 130 | D | A | -2.0450 | |
| 131 | T | A | -1.6530 | |
| 132 | Q | A | -1.6711 | |
| 133 | A | A | -0.8147 | |
| 134 | L | A | -0.4197 | |
| 135 | S | A | -0.4639 | |
| 136 | W | A | 0.0000 | |
| 137 | R | A | -1.0495 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.5532 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.1626 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.8853 | |
| 155 | Y | A | -0.8534 | |
| 156 | T | A | -0.5620 | |
| 157 | T | A | 0.0000 | |
| 158 | I | A | -0.3062 | |
| 159 | A | A | -0.7659 | |
| 160 | K | A | -2.0582 | |
| 161 | P | A | -1.8798 | |
| 162 | E | A | -2.4025 | |
| 163 | P | A | -1.4598 | |
| 164 | G | A | -0.7791 | |
| 165 | L | A | -0.4701 | |
| 166 | P | A | -0.4554 | |
| 167 | P | A | -0.6933 | |
| 168 | G | A | -0.6437 | |
| 169 | A | A | -0.7310 | |
| 170 | K | A | -1.3199 | |
| 171 | P | A | -1.0207 | |
| 172 | P | A | -0.5763 | |
| 173 | L | A | 0.5812 | |
| 174 | E | A | -0.3559 | |
| 175 | T | A | -0.6658 | |
| 176 | K | A | -1.1395 | |
| 177 | T | A | -0.6647 | |
| 178 | S | A | -0.2844 | |
| 179 | I | A | -0.0079 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.7507 | |
| 182 | H | A | -0.9902 | |
| 183 | G | A | -0.6878 | |
| 184 | D | A | -0.6158 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.4446 | |
| 190 | F | A | -0.0203 | |
| 191 | G | A | -0.2279 | |
| 192 | A | A | -0.4125 | |
| 193 | K | A | -1.1034 | |
| 194 | D | A | -1.0874 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.7942 | |
| 197 | K | A | -1.9475 | |
| 198 | L | A | -0.9508 | |
| 199 | L | A | -1.4827 | |
| 200 | P | A | -1.9716 | |
| 201 | R | A | -2.7498 | |
| 202 | K | A | -2.8537 | |
| 203 | N | A | -2.0309 | |
| 204 | D | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.6269 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.1764 | |
| 211 | N | A | -1.7492 | |
| 212 | T | A | -0.9718 | |
| 213 | T | A | -0.8009 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.1066 | |
| 217 | V | A | 0.0000 | |
| 218 | D | A | -0.5510 | |
| 219 | Y | A | -0.5254 | |
| 220 | E | A | -1.3459 | |
| 221 | G | A | -0.7311 | |
| 222 | M | A | 0.0000 | |
| 223 | L | A | 0.6236 | |
| 224 | A | A | 0.0260 | |
| 225 | E | A | -0.2888 | |
| 226 | P | A | -0.0629 | |
| 227 | Y | A | 0.0000 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | -0.2743 | |
| 230 | R | A | -0.2736 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7588 | |
| 234 | H | A | -0.9653 | |
| 235 | N | A | -1.6443 | |
| 236 | E | A | -2.5842 | |
| 237 | K | A | -2.6612 | |
| 238 | E | A | -2.7303 | |
| 239 | S | A | -1.8596 | |
| 240 | S | A | -1.8167 | |
| 241 | K | A | -2.2926 | |
| 242 | A | A | -1.3433 | |
| 243 | S | A | -1.5317 | |
| 244 | K | A | -2.2122 | |
| 245 | N | A | -1.4967 | |
| 246 | L | A | 0.0000 | |
| 247 | R | A | -0.1609 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.0263 | |
| 250 | G | A | -0.5995 | |
| 251 | P | A | -0.1072 | |
| 252 | V | A | 0.4566 | |
| 253 | L | A | 0.6990 | |
| 254 | N | A | -0.3518 | |
| 255 | P | A | -0.0128 | |
| 256 | L | A | 0.8868 | |
| 257 | P | A | 0.1121 | |
| 258 | A | A | 0.3159 | |
| 259 | A | A | -0.1310 | |
| 260 | P | A | -0.6508 | |
| 261 | P | A | -0.7800 | |
| 262 | P | A | -0.6744 | |
| 263 | S | A | -0.5967 | |
| 264 | K | A | -1.0178 | |
| 265 | L | A | 0.8772 | |
| 266 | Y | A | 0.4632 | |
| 267 | T | A | -0.1411 | |
| 268 | P | A | 0.3303 | |
| 269 | P | A | 0.0627 | |
| 270 | S | A | -0.6371 | |
| 271 | P | A | -0.8389 | |
| 272 | E | A | -1.8984 | |
| 273 | S | A | -0.5227 | |
| 274 | P | A | 0.1617 | |
| 275 | Y | A | 1.4558 | |
| 276 | A | A | 0.9975 | |
| 277 | V | A | 2.1503 | |
| 278 | L | A | 1.7621 | |
| 279 | P | A | 0.4719 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.3937 | |
| 282 | D | A | -0.1161 | |
| 283 | Y | A | 0.8420 | |
| 284 | F | A | 0.4419 | |
| 285 | T | A | -0.3524 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.5290 | |
| 289 | E | A | 0.0000 | |
| 290 | G | A | 0.0000 | |
| 291 | E | A | -2.1500 | |
| 292 | I | A | -1.5740 | |
| 293 | T | A | -2.0989 | |
| 294 | E | A | -2.9184 | |
| 295 | E | A | -3.1894 | |
| 296 | D | A | -2.9889 | |
| 297 | L | A | -1.8110 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.1734 | |
| 301 | K | A | -1.4843 | |
| 302 | P | A | -0.3900 | |
| 303 | V | A | -0.0712 | |
| 304 | F | A | -0.3805 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.4815 | |
| 307 | K | A | -2.7086 | |
| 308 | A | A | 0.0000 | |
| 309 | P | A | -0.4066 | |
| 310 | G | A | -0.1738 | |
| 311 | L | A | -0.5237 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | G | A | -1.1242 | |
| 319 | N | A | -1.0808 | |
| 320 | R | A | -1.2764 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.4690 | |
| 333 | I | A | -1.8866 | |
| 334 | E | A | -2.3798 | |
| 335 | T | A | -1.3711 | |
| 336 | I | A | -0.3092 | |
| 337 | E | A | -1.0339 | |
| 338 | T | A | 0.0809 | |
| 339 | R | A | -0.1147 | |
| 340 | I | A | 1.5385 | |
| 341 | S | A | -0.1343 | |
| 342 | T | A | -0.8133 | |
| 343 | P | A | -1.7743 | |
| 344 | E | A | -2.9941 | |
| 345 | E | A | -2.8968 | |
| 346 | D | A | -2.0331 | |
| 347 | V | A | 0.5409 | |
| 348 | Y | A | 0.6433 | |
| 349 | N | A | -0.5884 | |
| 350 | P | A | -0.4165 | |
| 351 | D | A | -1.3057 | |
| 352 | N | A | -0.6942 | |
| 353 | Y | A | 0.4960 | |
| 354 | V | A | 1.1521 | |
| 355 | T | A | -0.0772 | |
| 356 | S | A | -0.7518 | |
| 357 | K | A | -1.7937 | |
| 358 | R | A | -2.0249 | |
| 359 | Y | A | 0.0000 | |
| 360 | K | A | -2.4647 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.7689 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.5858 | |
| 365 | L | A | 0.0000 | |
| 366 | E | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -1.0997 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6996 | |
| 376 | L | A | -0.3497 | |
| 377 | T | A | -0.6398 | |
| 378 | P | A | -0.9631 | |
| 379 | E | A | -1.7802 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.3475 | |
| 382 | A | A | -0.7814 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | A | A | -0.7991 | |
| 386 | R | A | -1.3825 | |
| 387 | L | A | -0.7387 | |
| 388 | D | A | -0.7352 | |
| 389 | P | A | -0.6968 | |
| 390 | S | A | -0.8865 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -0.4793 | |
| 393 | V | A | -0.9504 | |
| 394 | D | A | -1.9576 | |
| 395 | S | A | -1.5737 | |
| 396 | N | A | -2.0664 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | -1.1885 | |
| 399 | D | A | -1.7455 | |
| 400 | I | A | -0.3496 | |
| 401 | P | A | -0.1212 | |
| 402 | P | A | -0.1913 | |
| 403 | V | A | 0.9284 | |
| 404 | T | A | -0.3425 | |
| 405 | R | A | -1.6457 | |
| 406 | P | A | -1.3915 | |
| 407 | D | A | -1.6562 | |
| 408 | P | A | -0.9656 | |
| 409 | L | A | -0.4685 | |
| 410 | A | A | -0.6505 | |
| 411 | G | A | -0.7270 | |
| 412 | L | A | -0.5678 | |
| 413 | K | A | -1.8995 | |
| 414 | F | A | -1.3108 | |
| 415 | H | A | -1.5989 | |
| 416 | E | A | -2.4556 | |
| 417 | I | A | -1.9017 | |
| 418 | D | A | -2.6754 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.6761 | |
| 421 | D | A | -2.4031 | |
| 422 | K | A | -2.0829 | |
| 423 | L | A | -0.7908 | |
| 424 | S | A | -0.8376 | |
| 425 | T | A | -0.4355 | |
| 426 | D | A | -1.3529 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.4418 | |
| 429 | K | A | -2.3794 | |
| 430 | S | A | 0.0000 | |
| 431 | P | A | -0.9337 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.7705 | |
| 435 | L | A | -0.2501 | |
| 436 | Y | A | -0.1393 | |
| 437 | L | A | 0.1145 | |
| 438 | N | A | -1.4795 | |
| 439 | R | A | -1.8601 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine