| Chain sequence(s) |
A: SQPQQPISQQQQQQQQQQQQQQQQI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.8492 | |
| 2 | Q | A | -2.0397 | |
| 3 | P | A | -1.7396 | |
| 4 | Q | A | -2.2999 | |
| 5 | Q | A | -2.0030 | |
| 6 | P | A | -0.9445 | |
| 7 | I | A | 0.1898 | |
| 8 | S | A | -1.6917 | |
| 9 | Q | A | -2.8108 | |
| 10 | Q | A | -2.7344 | |
| 11 | Q | A | -3.1976 | |
| 12 | Q | A | -3.6600 | |
| 13 | Q | A | -3.8826 | |
| 14 | Q | A | -4.4040 | |
| 15 | Q | A | -4.5594 | |
| 16 | Q | A | -4.5693 | |
| 17 | Q | A | -4.5910 | |
| 18 | Q | A | -4.5991 | |
| 19 | Q | A | -4.2616 | |
| 20 | Q | A | -4.0761 | |
| 21 | Q | A | -4.1316 | |
| 22 | Q | A | -3.7823 | |
| 23 | Q | A | -3.4275 | |
| 24 | Q | A | -2.9553 |