| Chain sequence(s) |
D: VHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELNCDKLHVDPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH
input PDB |
| Selected Chain(s) | D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with D chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:52)
[INFO] Main: Simulation completed successfully. (00:02:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | V | D | 0.5181 | |
| 3 | H | D | -0.7023 | |
| 4 | L | D | 0.0000 | |
| 5 | T | D | -1.3388 | |
| 6 | P | D | -1.6918 | |
| 7 | E | D | -2.4367 | |
| 8 | E | D | -1.9764 | |
| 9 | K | D | -1.8526 | |
| 10 | S | D | -1.4267 | |
| 11 | A | D | -1.0226 | |
| 12 | V | D | 0.0000 | |
| 13 | T | D | -0.6373 | |
| 14 | A | D | -0.6302 | |
| 15 | L | D | 0.0000 | |
| 16 | W | D | -0.5594 | |
| 17 | G | D | -1.1717 | |
| 18 | K | D | -1.8477 | |
| 19 | V | D | 0.0000 | |
| 20 | N | D | -1.8192 | |
| 21 | V | D | -0.7533 | |
| 22 | D | D | -2.7555 | |
| 23 | E | D | -2.9118 | |
| 24 | V | D | 0.0000 | |
| 25 | G | D | 0.0000 | |
| 26 | G | D | 0.0000 | |
| 27 | E | D | -1.5246 | |
| 28 | A | D | 0.0000 | |
| 29 | L | D | 0.0000 | |
| 30 | G | D | 0.0000 | |
| 31 | R | D | 0.1651 | |
| 32 | L | D | 0.0000 | |
| 33 | L | D | 0.0000 | |
| 34 | V | D | 0.9254 | |
| 35 | V | D | 1.9853 | |
| 36 | Y | D | 1.2480 | |
| 37 | P | D | 0.3479 | |
| 38 | W | D | 0.3152 | |
| 39 | T | D | 0.0000 | |
| 40 | Q | D | -1.0858 | |
| 41 | R | D | -1.9265 | |
| 42 | F | D | -0.5346 | |
| 43 | F | D | -1.3108 | |
| 44 | E | D | -2.4931 | |
| 45 | S | D | -1.5352 | |
| 46 | F | D | -1.3921 | |
| 47 | G | D | -1.9860 | |
| 48 | D | D | -2.7004 | |
| 49 | L | D | 0.0000 | |
| 50 | S | D | -1.1050 | |
| 51 | T | D | -1.0478 | |
| 52 | P | D | -0.8772 | |
| 53 | D | D | -2.0995 | |
| 54 | A | D | -1.5782 | |
| 55 | V | D | 0.0000 | |
| 56 | M | D | -1.0414 | |
| 57 | G | D | -1.5134 | |
| 58 | N | D | 0.0000 | |
| 59 | P | D | -1.4192 | |
| 60 | K | D | -1.9465 | |
| 61 | V | D | 0.0000 | |
| 62 | K | D | -2.6335 | |
| 63 | A | D | -2.1676 | |
| 64 | H | D | -1.7039 | |
| 65 | G | D | 0.0000 | |
| 66 | K | D | -2.6509 | |
| 67 | K | D | -2.2421 | |
| 68 | V | D | -0.8451 | |
| 69 | L | D | 0.0000 | |
| 70 | G | D | -1.2179 | |
| 71 | A | D | -0.9428 | |
| 72 | F | D | 0.0000 | |
| 73 | S | D | -0.7614 | |
| 74 | D | D | -1.6194 | |
| 75 | G | D | 0.0000 | |
| 76 | L | D | -0.8702 | |
| 77 | A | D | -1.0110 | |
| 78 | H | D | -2.0824 | |
| 79 | L | D | -1.6694 | |
| 80 | D | D | -2.6107 | |
| 81 | N | D | -2.8596 | |
| 82 | L | D | 0.0000 | |
| 83 | K | D | -2.9258 | |
| 84 | G | D | -1.9888 | |
| 85 | T | D | -1.5798 | |
| 86 | F | D | 0.0000 | |
| 87 | A | D | -1.0953 | |
| 88 | T | D | -0.5566 | |
| 89 | L | D | -0.4847 | |
| 90 | S | D | 0.0000 | |
| 91 | E | D | -2.5049 | |
| 92 | L | D | -1.1850 | |
| 93 | N | D | -1.4681 | |
| 94 | C | D | 0.0000 | |
| 95 | D | D | -3.2572 | |
| 96 | K | D | -2.5553 | |
| 97 | L | D | -1.1599 | |
| 98 | H | D | -1.9919 | |
| 99 | V | D | -1.7437 | |
| 100 | D | D | -2.6189 | |
| 101 | P | D | -2.4232 | |
| 102 | E | D | -2.9501 | |
| 103 | N | D | 0.0000 | |
| 104 | F | D | 0.0000 | |
| 105 | R | D | -2.8916 | |
| 106 | L | D | -1.1004 | |
| 107 | L | D | -0.7843 | |
| 108 | G | D | 0.0000 | |
| 109 | N | D | -1.2449 | |
| 110 | V | D | 0.0000 | |
| 111 | L | D | 0.0000 | |
| 112 | V | D | 0.0000 | |
| 113 | C | D | -0.2150 | |
| 114 | V | D | 0.0000 | |
| 115 | L | D | 0.0000 | |
| 116 | A | D | -1.3034 | |
| 117 | H | D | -1.5624 | |
| 118 | H | D | -1.9058 | |
| 119 | F | D | -1.9295 | |
| 120 | G | D | -2.3121 | |
| 121 | K | D | -2.9943 | |
| 122 | E | D | -2.8896 | |
| 123 | F | D | 0.0000 | |
| 124 | T | D | -1.3744 | |
| 125 | P | D | -0.9362 | |
| 126 | P | D | -0.7445 | |
| 127 | V | D | -1.0154 | |
| 128 | Q | D | -1.0151 | |
| 129 | A | D | -0.6835 | |
| 130 | A | D | 0.0000 | |
| 131 | Y | D | 0.0000 | |
| 132 | Q | D | -1.2114 | |
| 133 | K | D | -0.7374 | |
| 134 | V | D | 0.0000 | |
| 135 | V | D | 0.0000 | |
| 136 | A | D | -0.9592 | |
| 137 | G | D | -0.7479 | |
| 138 | V | D | 0.0000 | |
| 139 | A | D | 0.0000 | |
| 140 | N | D | -2.1982 | |
| 141 | A | D | 0.0000 | |
| 142 | L | D | -1.3664 | |
| 143 | A | D | 0.0000 | |
| 144 | H | D | -2.4867 | |
| 145 | K | D | -2.8545 | |
| 146 | Y | D | -1.9981 | |
| 147 | H | D | -1.6876 |