| Chain sequence(s) |
A: GPLPDNPEPELLPTSSYVKPTDLLYYAETDLLTETGNPTKDIIVNGKVVVKRVSAYQWRVFRLTLPDPNKLPLPSEDFINRETEILIWRLLALKIHVFGPLGTGTYGHANYNAFGDVTNPTTYQHETEDDTVALSFTPKRLQEYIVGDLPPTGVYTAPAPPAPGLPPGAIPPTTRVHDTIEDGDMADIGFGARDFAALEPRKNDVPDIILDTTTKRVDYEGMKAEPTGRRMFDSFSSESSSNVKKYVKCGPDLIPLPDAPPPSPLYTKPPPSSPFAILPSTNYFTLPDAGEITEADLLFNKPHFFKKAAGKNDYILWGNKLYVMVLDNTRAAIETIRTQLCTPAVNVYDPSCYVTSKRYTRQYRLELIVQLCKIPLTPETRALLARLDPRFLVNAELPDIPPVEEPDPLAGKKFIDIDLTDKLSSNLAESELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2053 | |
| 2 | P | A | -0.0841 | |
| 3 | L | A | 0.4993 | |
| 4 | P | A | -0.8928 | |
| 5 | D | A | -2.4758 | |
| 6 | N | A | -2.5808 | |
| 7 | P | A | -2.6777 | |
| 8 | E | A | -3.0934 | |
| 9 | P | A | -2.0030 | |
| 10 | E | A | -1.9895 | |
| 11 | L | A | -0.4757 | |
| 12 | L | A | 0.7251 | |
| 13 | P | A | -0.0550 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -0.7936 | |
| 16 | S | A | -0.3258 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | K | A | -1.8220 | |
| 20 | P | A | -1.5137 | |
| 21 | T | A | -1.2981 | |
| 22 | D | A | -1.6471 | |
| 23 | L | A | -0.5309 | |
| 24 | L | A | -0.2094 | |
| 25 | Y | A | -0.1328 | |
| 26 | Y | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.1119 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.6325 | |
| 31 | L | A | -0.2401 | |
| 32 | L | A | -0.1077 | |
| 33 | T | A | -0.3749 | |
| 34 | E | A | -0.9048 | |
| 35 | T | A | -1.0524 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | -2.1480 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.7566 | |
| 40 | K | A | -2.2450 | |
| 41 | D | A | -0.8710 | |
| 42 | I | A | 1.5174 | |
| 43 | I | A | 2.5434 | |
| 44 | V | A | 2.0125 | |
| 45 | N | A | -0.4520 | |
| 46 | G | A | -0.2827 | |
| 47 | K | A | 0.0099 | |
| 48 | V | A | 1.6946 | |
| 49 | V | A | 2.5493 | |
| 50 | V | A | 0.9414 | |
| 51 | K | A | -1.1459 | |
| 52 | R | A | -1.8088 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | -1.4470 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.3752 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.1283 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.8266 | |
| 70 | K | A | -1.9338 | |
| 71 | L | A | -0.8435 | |
| 72 | P | A | -0.7516 | |
| 73 | L | A | -0.7741 | |
| 74 | P | A | -0.7582 | |
| 75 | S | A | -1.5846 | |
| 76 | E | A | -3.0335 | |
| 77 | D | A | -3.0387 | |
| 78 | F | A | -1.6994 | |
| 79 | I | A | 0.0000 | |
| 80 | N | A | -3.4212 | |
| 81 | R | A | -4.0454 | |
| 82 | E | A | -3.4359 | |
| 83 | T | A | -2.0745 | |
| 84 | E | A | -2.0378 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.4025 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.5010 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.2977 | |
| 99 | G | A | -0.1770 | |
| 100 | P | A | -0.1018 | |
| 101 | L | A | 0.1083 | |
| 102 | G | A | -0.0952 | |
| 103 | T | A | -0.2286 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.1212 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.6143 | |
| 108 | H | A | -0.8733 | |
| 109 | A | A | -0.5523 | |
| 110 | N | A | -1.5778 | |
| 111 | Y | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | F | A | -0.5980 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.9535 | |
| 117 | V | A | -0.9430 | |
| 118 | T | A | -1.3186 | |
| 119 | N | A | -1.8556 | |
| 120 | P | A | -1.1563 | |
| 121 | T | A | -0.6737 | |
| 122 | T | A | -0.5570 | |
| 123 | Y | A | 0.2454 | |
| 124 | Q | A | -1.1555 | |
| 125 | H | A | -1.0268 | |
| 126 | E | A | -2.2512 | |
| 127 | T | A | -2.3927 | |
| 128 | E | A | -3.0288 | |
| 129 | D | A | -3.0536 | |
| 130 | D | A | -1.9073 | |
| 131 | T | A | -0.9709 | |
| 132 | V | A | 0.1134 | |
| 133 | A | A | 0.0371 | |
| 134 | L | A | 0.0417 | |
| 135 | S | A | -0.1870 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.4526 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | -1.0381 | |
| 140 | R | A | -1.0892 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | -0.0940 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.9578 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | -1.2883 | |
| 155 | Y | A | -1.2795 | |
| 156 | T | A | -1.1594 | |
| 157 | A | A | -0.6234 | |
| 158 | P | A | -0.3377 | |
| 159 | A | A | -0.5495 | |
| 160 | P | A | -0.4760 | |
| 161 | P | A | -0.4452 | |
| 162 | A | A | -0.2642 | |
| 163 | P | A | -0.4048 | |
| 164 | G | A | -0.3837 | |
| 165 | L | A | 0.3426 | |
| 166 | P | A | -0.0687 | |
| 167 | P | A | -0.2475 | |
| 168 | G | A | 0.1486 | |
| 169 | A | A | 0.9073 | |
| 170 | I | A | 2.0694 | |
| 171 | P | A | 0.7016 | |
| 172 | P | A | 0.2481 | |
| 173 | T | A | -0.3764 | |
| 174 | T | A | -1.0952 | |
| 175 | R | A | -1.9318 | |
| 176 | V | A | -1.0805 | |
| 177 | H | A | -1.6262 | |
| 178 | D | A | -1.0877 | |
| 179 | T | A | -0.8477 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.2640 | |
| 182 | D | A | -1.2542 | |
| 183 | G | A | -0.7334 | |
| 184 | D | A | -0.9398 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.8801 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.5943 | |
| 190 | F | A | -0.1316 | |
| 191 | G | A | -0.7055 | |
| 192 | A | A | -1.1252 | |
| 193 | R | A | -1.0730 | |
| 194 | D | A | -0.7087 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -1.3299 | |
| 197 | A | A | -0.3682 | |
| 198 | L | A | -0.3877 | |
| 199 | E | A | 0.0000 | |
| 200 | P | A | -1.8191 | |
| 201 | R | A | -2.8536 | |
| 202 | K | A | -3.3188 | |
| 203 | N | A | -2.0861 | |
| 204 | D | A | -1.4339 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.7304 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.6061 | |
| 211 | D | A | -2.2659 | |
| 212 | T | A | -1.0586 | |
| 213 | T | A | -0.6580 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | R | A | -2.0511 | |
| 217 | V | A | 0.0000 | |
| 218 | D | A | -1.6054 | |
| 219 | Y | A | -1.6085 | |
| 220 | E | A | -2.5166 | |
| 221 | G | A | -1.8866 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.6208 | |
| 224 | A | A | -1.5950 | |
| 225 | E | A | -1.5025 | |
| 226 | P | A | -0.9078 | |
| 227 | T | A | -0.5343 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | -0.7966 | |
| 230 | R | A | -0.7584 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.7901 | |
| 234 | S | A | 0.0793 | |
| 235 | F | A | 0.6827 | |
| 236 | S | A | 0.0421 | |
| 237 | S | A | -0.6069 | |
| 238 | E | A | -1.3002 | |
| 239 | S | A | -1.2044 | |
| 240 | S | A | -1.1926 | |
| 241 | S | A | -0.8362 | |
| 242 | N | A | -1.2659 | |
| 243 | V | A | 0.1060 | |
| 244 | K | A | -1.6427 | |
| 245 | K | A | -1.6071 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | K | A | -0.4778 | |
| 249 | C | A | -0.9694 | |
| 250 | G | A | -0.7300 | |
| 251 | P | A | 0.1401 | |
| 252 | D | A | 0.9258 | |
| 253 | L | A | 2.4971 | |
| 254 | I | A | 2.5724 | |
| 255 | P | A | 0.9706 | |
| 256 | L | A | 0.9338 | |
| 257 | P | A | -0.2446 | |
| 258 | D | A | -1.7588 | |
| 259 | A | A | -1.0357 | |
| 260 | P | A | -1.1063 | |
| 261 | P | A | -1.0520 | |
| 262 | P | A | -0.5277 | |
| 263 | S | A | -0.4511 | |
| 264 | P | A | 0.3963 | |
| 265 | L | A | 1.2243 | |
| 266 | Y | A | 0.3500 | |
| 267 | T | A | -0.4523 | |
| 268 | K | A | -1.2124 | |
| 269 | P | A | -0.1354 | |
| 270 | P | A | -0.5512 | |
| 271 | P | A | -0.1878 | |
| 272 | S | A | -0.0710 | |
| 273 | S | A | 0.3894 | |
| 274 | P | A | 0.7055 | |
| 275 | F | A | 1.7279 | |
| 276 | A | A | 1.3237 | |
| 277 | I | A | 2.3577 | |
| 278 | L | A | 1.4338 | |
| 279 | P | A | 0.3195 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | 0.3050 | |
| 282 | N | A | 0.2150 | |
| 283 | Y | A | 0.7541 | |
| 284 | F | A | -0.0696 | |
| 285 | T | A | -0.6219 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.1976 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | -1.3769 | |
| 291 | E | A | -2.0581 | |
| 292 | I | A | -1.2074 | |
| 293 | T | A | -1.4588 | |
| 294 | E | A | -1.9516 | |
| 295 | A | A | -1.2879 | |
| 296 | D | A | -1.7232 | |
| 297 | L | A | -1.0455 | |
| 298 | L | A | -0.5503 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.1995 | |
| 301 | K | A | -1.6028 | |
| 302 | P | A | -0.8636 | |
| 303 | H | A | -0.5932 | |
| 304 | F | A | -0.4636 | |
| 305 | F | A | 0.0000 | |
| 306 | K | A | -2.4622 | |
| 307 | K | A | -2.7195 | |
| 308 | A | A | 0.0000 | |
| 309 | A | A | -1.2158 | |
| 310 | G | A | -1.3994 | |
| 311 | K | A | -0.7941 | |
| 312 | N | A | 0.0000 | |
| 313 | D | A | -1.3541 | |
| 314 | Y | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | G | A | -0.7192 | |
| 319 | N | A | -0.6899 | |
| 320 | K | A | -0.8754 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | M | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.0074 | |
| 331 | A | A | 0.0000 | |
| 332 | A | A | -0.5169 | |
| 333 | I | A | -1.2505 | |
| 334 | E | A | -2.6203 | |
| 335 | T | A | -1.8614 | |
| 336 | I | A | -1.0548 | |
| 337 | R | A | -1.3840 | |
| 338 | T | A | -0.1462 | |
| 339 | Q | A | 0.2612 | |
| 340 | L | A | 1.5555 | |
| 341 | C | A | 0.8445 | |
| 342 | T | A | 0.3074 | |
| 343 | P | A | -0.0442 | |
| 344 | A | A | 0.4520 | |
| 345 | V | A | 0.9494 | |
| 346 | N | A | 0.1282 | |
| 347 | V | A | 1.8373 | |
| 348 | Y | A | 1.6747 | |
| 349 | D | A | 0.3399 | |
| 350 | P | A | 0.2672 | |
| 351 | S | A | 0.2224 | |
| 352 | C | A | 0.0000 | |
| 353 | Y | A | 0.7925 | |
| 354 | V | A | 1.0401 | |
| 355 | T | A | -0.3632 | |
| 356 | S | A | -1.3347 | |
| 357 | K | A | -2.6983 | |
| 358 | R | A | -2.5901 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.9082 | |
| 361 | R | A | 0.0000 | |
| 362 | Q | A | -0.2186 | |
| 363 | Y | A | 0.0000 | |
| 364 | R | A | -0.7875 | |
| 365 | L | A | 0.0000 | |
| 366 | E | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.3964 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -1.1238 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -1.4493 | |
| 376 | L | A | 0.0000 | |
| 377 | T | A | -1.0632 | |
| 378 | P | A | -1.4225 | |
| 379 | E | A | -2.1944 | |
| 380 | T | A | 0.0000 | |
| 381 | R | A | -1.5634 | |
| 382 | A | A | -1.2504 | |
| 383 | L | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | A | A | -0.6454 | |
| 386 | R | A | -1.0239 | |
| 387 | L | A | -0.3288 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -0.7607 | |
| 390 | R | A | -1.1995 | |
| 391 | F | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.0705 | |
| 394 | N | A | -1.6132 | |
| 395 | A | A | -1.9669 | |
| 396 | E | A | -2.6235 | |
| 397 | L | A | -1.9717 | |
| 398 | P | A | -1.5931 | |
| 399 | D | A | -1.9535 | |
| 400 | I | A | -0.9327 | |
| 401 | P | A | -0.8275 | |
| 402 | P | A | -1.2267 | |
| 403 | V | A | -1.0741 | |
| 404 | E | A | -2.8169 | |
| 405 | E | A | -3.1553 | |
| 406 | P | A | -2.1575 | |
| 407 | D | A | -2.2045 | |
| 408 | P | A | -1.2485 | |
| 409 | L | A | -0.8542 | |
| 410 | A | A | -1.0412 | |
| 411 | G | A | -1.2873 | |
| 412 | K | A | -1.7635 | |
| 413 | K | A | -2.4053 | |
| 414 | F | A | -1.4599 | |
| 415 | I | A | -1.2082 | |
| 416 | D | A | -2.4005 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.7130 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.6246 | |
| 421 | D | A | -2.3579 | |
| 422 | K | A | -1.9819 | |
| 423 | L | A | -0.7921 | |
| 424 | S | A | -0.9467 | |
| 425 | S | A | -0.6208 | |
| 426 | N | A | -1.5541 | |
| 427 | L | A | 0.0000 | |
| 428 | A | A | -1.7052 | |
| 429 | E | A | -2.7666 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.3709 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.4580 | |
| 435 | L | A | -0.9010 | |
| 436 | Y | A | -0.4310 | |
| 437 | L | A | 0.0340 | |
| 438 | N | A | -1.6098 | |
| 439 | R | A | -1.9265 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine