| Chain sequence(s) |
A: AGCIETCYTFPCISEMINCSCKNSRCQKNG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:28)
[INFO] Main: Simulation completed successfully. (00:00:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.1224 | |
| 2 | G | A | -0.6325 | |
| 3 | C | A | 0.0000 | |
| 4 | I | A | 1.3455 | |
| 5 | E | A | 0.7444 | |
| 6 | T | A | 0.2511 | |
| 7 | C | A | 0.4006 | |
| 8 | Y | A | 0.9807 | |
| 9 | T | A | 0.9066 | |
| 10 | F | A | 1.3873 | |
| 11 | P | A | 0.5720 | |
| 12 | C | A | 0.0000 | |
| 13 | I | A | 1.8144 | |
| 14 | S | A | 0.6679 | |
| 15 | E | A | -0.9111 | |
| 16 | M | A | 1.0074 | |
| 17 | I | A | 0.8209 | |
| 18 | N | A | -1.4371 | |
| 19 | C | A | 0.0000 | |
| 20 | S | A | -1.5035 | |
| 21 | C | A | -0.9129 | |
| 22 | K | A | -2.1016 | |
| 23 | N | A | -2.0094 | |
| 24 | S | A | -1.1259 | |
| 25 | R | A | -1.5982 | |
| 26 | C | A | 0.0000 | |
| 27 | Q | A | -2.2044 | |
| 28 | K | A | -2.5194 | |
| 29 | N | A | -2.4643 | |
| 30 | G | A | -1.6716 |