| Chain sequence(s) |
A: PRCCNGRRGCSSRWCRDHSRCC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:14)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -1.6896 | |
| 2 | R | A | -2.4673 | |
| 3 | C | A | -2.0672 | |
| 4 | C | A | -2.1119 | |
| 5 | N | A | -2.4408 | |
| 6 | G | A | -2.5679 | |
| 7 | R | A | -3.1300 | |
| 8 | R | A | -2.6934 | |
| 9 | G | A | -2.0399 | |
| 10 | C | A | -0.9669 | |
| 11 | S | A | -1.2031 | |
| 12 | S | A | -1.1898 | |
| 13 | R | A | -2.3625 | |
| 14 | W | A | -1.8506 | |
| 15 | C | A | 0.0000 | |
| 16 | R | A | -3.2888 | |
| 17 | D | A | -3.4290 | |
| 18 | H | A | -2.8076 | |
| 19 | S | A | 0.0000 | |
| 20 | R | A | -2.6472 | |
| 21 | C | A | -1.9550 | |
| 22 | C | A | -0.7827 |