Project name: REST_test

Status: done

Started: 2025-07-17 14:47:58
Settings
Chain sequence(s) A: MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:03)
Show buried residues

Minimal score value
-2.4343
Maximal score value
1.5331
Average score
-0.6084
Total score value
-46.2363

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.0872
2 Q A -0.8092
3 I A 0.0000
4 F A 0.4679
5 V A 0.0000
6 K A -1.1789
7 T A 0.0709
8 L A 1.5331
9 T A 0.1249
10 G A -0.7178
11 K A -1.3607
12 T A -0.4089
13 I A 0.0000
14 T A 0.0244
15 L A 0.0000
16 E A -1.8939
17 V A 0.0000
18 E A -1.8348
19 P A -0.4710
20 S A -0.2962
21 D A -0.4112
22 T A -0.0867
23 I A 0.0000
24 E A -2.1523
25 N A -0.9160
26 V A 0.0000
27 K A -0.1973
28 A A -0.1935
29 K A -0.8809
30 I A 0.0000
31 Q A -1.0009
32 D A -2.2689
33 K A -2.1899
34 E A -1.9078
35 G A -0.7978
36 I A 0.0572
37 P A -0.0571
38 P A -0.4107
39 D A -1.8394
40 Q A -0.7363
41 Q A 0.0000
42 R A -0.6404
43 L A 0.0000
44 I A 0.1109
45 F A 0.3562
46 A A 0.0258
47 G A -0.6588
48 K A -1.4065
49 Q A -1.3648
50 L A 0.0000
51 E A -2.1452
52 D A -2.4343
53 G A -1.0197
54 R A -1.3420
55 T A -0.2457
56 L A 0.0000
57 S A -0.5090
58 D A -1.2022
59 Y A -0.3015
60 N A -1.2607
61 I A 0.0000
62 Q A -1.4813
63 K A -2.1063
64 E A -2.1138
65 S A -0.3715
66 T A 0.0285
67 L A 0.0000
68 H A -0.8454
69 L A 0.0000
70 V A 0.4860
71 L A 0.5148
72 R A -1.4383
73 L A 0.8708
74 R A -1.6433
75 G A -0.8935
76 G A -0.5526
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Laboratory of Theory of Biopolymers 2018