| Chain sequence(s) |
L: KDFLNALYD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 482 | K | L | -2.0263 | |
| 483 | D | L | -1.7520 | |
| 484 | F | L | 1.9032 | |
| 485 | L | L | 1.8002 | |
| 486 | N | L | -0.2534 | |
| 487 | A | L | 0.2380 | |
| 488 | L | L | 1.7973 | |
| 489 | Y | L | 1.2722 | |
| 490 | D | L | -1.5510 |