| Chain sequence(s) |
A: MEIDLAPKLAKKVYGDDGGSYYAWCPNELPMLREGNIGAAKLALEKNGFALPRYSDSAKVAYVLQGNGVAGIVLPEQEEKVIAIKKGDAIALPFGVVTWWYNKEDTDLVVLFLGDTSKAHKAGQFTDFFLTGSNGIFTGFSTEFVSRAWDLDSNVVTSLVGSQTGKGIVKLEPNFKMPEPKKEHREGMALNCEEAPLDVDIKKGGRVVVLNTKNLPLVGEVGLGADLVRLDGGAMCSPGFSCDSALQVTYIVRGSGRVQVVGIDGKRVLETHVKAGNLFIVPRFFVVSKIGDPDGMEWFSIITTPNPIFTHLAGRTSAWKALSPEVLQAAFKVTPDLEKAFRSKRTADAIFFPPPN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:55)
[INFO] Main: Simulation completed successfully. (00:04:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1746 | |
| 2 | E | A | -1.2555 | |
| 3 | I | A | -0.7698 | |
| 4 | D | A | -1.5055 | |
| 5 | L | A | 0.0000 | |
| 6 | A | A | -0.8924 | |
| 7 | P | A | -0.5498 | |
| 8 | K | A | -0.0323 | |
| 9 | L | A | 0.7153 | |
| 10 | A | A | -0.0654 | |
| 11 | K | A | -1.2892 | |
| 12 | K | A | -1.2873 | |
| 13 | V | A | 0.6596 | |
| 14 | Y | A | -0.1906 | |
| 15 | G | A | -1.5145 | |
| 16 | D | A | -3.1548 | |
| 17 | D | A | -3.5633 | |
| 18 | G | A | 0.0000 | |
| 19 | G | A | 0.0000 | |
| 20 | S | A | -1.1255 | |
| 21 | Y | A | 0.0000 | |
| 22 | Y | A | -0.2375 | |
| 23 | A | A | 0.0000 | |
| 24 | W | A | 0.0000 | |
| 25 | C | A | -0.9868 | |
| 26 | P | A | -2.2091 | |
| 27 | N | A | -2.4019 | |
| 28 | E | A | -2.4765 | |
| 29 | L | A | 0.0000 | |
| 30 | P | A | -2.1607 | |
| 31 | M | A | 0.0000 | |
| 32 | L | A | 0.0000 | |
| 33 | R | A | -3.3313 | |
| 34 | E | A | -2.7879 | |
| 35 | G | A | 0.0000 | |
| 36 | N | A | -2.3727 | |
| 37 | I | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | A | A | 0.0000 | |
| 40 | A | A | 0.0000 | |
| 41 | K | A | -0.3072 | |
| 42 | L | A | 0.0000 | |
| 43 | A | A | -0.5562 | |
| 44 | L | A | 0.0000 | |
| 45 | E | A | -3.6624 | |
| 46 | K | A | -4.1527 | |
| 47 | N | A | -3.3073 | |
| 48 | G | A | 0.0000 | |
| 49 | F | A | -1.0190 | |
| 50 | A | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | P | A | 0.4322 | |
| 53 | R | A | 0.0000 | |
| 54 | Y | A | 1.1351 | |
| 55 | S | A | 0.0000 | |
| 56 | D | A | 0.0000 | |
| 57 | S | A | 0.0000 | |
| 58 | A | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | A | A | 0.0000 | |
| 62 | Y | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | L | A | 0.0000 | |
| 65 | Q | A | -1.5233 | |
| 66 | G | A | -2.2578 | |
| 67 | N | A | -2.6694 | |
| 68 | G | A | 0.0000 | |
| 69 | V | A | 0.0000 | |
| 70 | A | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | V | A | -0.8848 | |
| 74 | L | A | -0.9516 | |
| 75 | P | A | -1.4415 | |
| 76 | E | A | -2.8430 | |
| 77 | Q | A | -3.0621 | |
| 78 | E | A | -3.0746 | |
| 79 | E | A | -2.0371 | |
| 80 | K | A | -2.0197 | |
| 81 | V | A | 0.0000 | |
| 82 | I | A | 0.0000 | |
| 83 | A | A | -1.3691 | |
| 84 | I | A | 0.0000 | |
| 85 | K | A | -2.1393 | |
| 86 | K | A | -2.4742 | |
| 87 | G | A | 0.0000 | |
| 88 | D | A | 0.0000 | |
| 89 | A | A | 0.0000 | |
| 90 | I | A | 0.0000 | |
| 91 | A | A | 0.0000 | |
| 92 | L | A | 0.0000 | |
| 93 | P | A | 0.0000 | |
| 94 | F | A | 0.8199 | |
| 95 | G | A | 0.7298 | |
| 96 | V | A | 0.0000 | |
| 97 | V | A | 0.7359 | |
| 98 | T | A | 0.0000 | |
| 99 | W | A | 0.0000 | |
| 100 | W | A | 0.0000 | |
| 101 | Y | A | 0.0000 | |
| 102 | N | A | 0.0000 | |
| 103 | K | A | -3.4585 | |
| 104 | E | A | -3.7581 | |
| 105 | D | A | -3.7602 | |
| 106 | T | A | -2.8131 | |
| 107 | D | A | -3.0333 | |
| 108 | L | A | 0.0000 | |
| 109 | V | A | -0.9154 | |
| 110 | V | A | 0.0000 | |
| 111 | L | A | 0.0000 | |
| 112 | F | A | 0.0000 | |
| 113 | L | A | 0.0000 | |
| 114 | G | A | 0.0000 | |
| 115 | D | A | -0.8314 | |
| 116 | T | A | 0.0000 | |
| 117 | S | A | -2.1055 | |
| 118 | K | A | -2.2207 | |
| 119 | A | A | -1.9831 | |
| 120 | H | A | -2.2889 | |
| 121 | K | A | -2.8285 | |
| 122 | A | A | -2.5783 | |
| 123 | G | A | 0.0000 | |
| 124 | Q | A | -1.3390 | |
| 125 | F | A | -0.6726 | |
| 126 | T | A | -0.4418 | |
| 127 | D | A | 0.3123 | |
| 128 | F | A | 1.1230 | |
| 129 | F | A | 0.0000 | |
| 130 | L | A | 0.9054 | |
| 131 | T | A | 0.1135 | |
| 132 | G | A | 0.0000 | |
| 133 | S | A | -1.2684 | |
| 134 | N | A | -1.3542 | |
| 135 | G | A | 0.0000 | |
| 136 | I | A | 1.0605 | |
| 137 | F | A | 1.1358 | |
| 138 | T | A | 0.2993 | |
| 139 | G | A | 0.1976 | |
| 140 | F | A | 1.2677 | |
| 141 | S | A | 0.2269 | |
| 142 | T | A | -0.7164 | |
| 143 | E | A | -1.7741 | |
| 144 | F | A | 0.2719 | |
| 145 | V | A | 0.0000 | |
| 146 | S | A | -1.6850 | |
| 147 | R | A | -2.4014 | |
| 148 | A | A | -0.8569 | |
| 149 | W | A | -0.6941 | |
| 150 | D | A | -2.2961 | |
| 151 | L | A | -1.5452 | |
| 152 | D | A | -2.4875 | |
| 153 | S | A | -1.8378 | |
| 154 | N | A | -1.3457 | |
| 155 | V | A | -0.0964 | |
| 156 | V | A | 0.0000 | |
| 157 | T | A | -0.4896 | |
| 158 | S | A | 0.1061 | |
| 159 | L | A | 0.9508 | |
| 160 | V | A | 0.6961 | |
| 161 | G | A | -0.3170 | |
| 162 | S | A | -0.3276 | |
| 163 | Q | A | -0.8502 | |
| 164 | T | A | -0.9546 | |
| 165 | G | A | -1.7727 | |
| 166 | K | A | -1.8564 | |
| 167 | G | A | 0.0000 | |
| 168 | I | A | 0.0000 | |
| 169 | V | A | 0.0000 | |
| 170 | K | A | -3.2817 | |
| 171 | L | A | -2.2283 | |
| 172 | E | A | -2.4154 | |
| 173 | P | A | -2.2069 | |
| 174 | N | A | -1.6709 | |
| 175 | F | A | -0.7646 | |
| 176 | K | A | -1.9733 | |
| 177 | M | A | -1.1951 | |
| 178 | P | A | -1.4668 | |
| 179 | E | A | -2.7137 | |
| 180 | P | A | -2.5705 | |
| 181 | K | A | -3.9464 | |
| 182 | K | A | -4.1109 | |
| 183 | E | A | -3.8215 | |
| 184 | H | A | -3.0795 | |
| 185 | R | A | -2.9706 | |
| 186 | E | A | -3.1470 | |
| 187 | G | A | -1.4756 | |
| 188 | M | A | 0.0000 | |
| 189 | A | A | 0.0000 | |
| 190 | L | A | -0.7569 | |
| 191 | N | A | 0.0000 | |
| 192 | C | A | 0.0000 | |
| 193 | E | A | -2.8307 | |
| 194 | E | A | -2.5901 | |
| 195 | A | A | -1.5284 | |
| 196 | P | A | -1.1080 | |
| 197 | L | A | -0.9299 | |
| 198 | D | A | -1.6083 | |
| 199 | V | A | -1.0600 | |
| 200 | D | A | -2.3977 | |
| 201 | I | A | -1.9304 | |
| 202 | K | A | -2.9306 | |
| 203 | K | A | -2.9038 | |
| 204 | G | A | 0.0000 | |
| 205 | G | A | 0.0000 | |
| 206 | R | A | -1.5987 | |
| 207 | V | A | 0.0000 | |
| 208 | V | A | 0.0000 | |
| 209 | V | A | -0.4802 | |
| 210 | L | A | 0.0000 | |
| 211 | N | A | -1.2569 | |
| 212 | T | A | -1.7238 | |
| 213 | K | A | -2.2399 | |
| 214 | N | A | -1.5163 | |
| 215 | L | A | 0.0000 | |
| 216 | P | A | -1.3737 | |
| 217 | L | A | 0.0000 | |
| 218 | V | A | 0.0000 | |
| 219 | G | A | -1.7114 | |
| 220 | E | A | -1.8703 | |
| 221 | V | A | 0.0000 | |
| 222 | G | A | -0.9279 | |
| 223 | L | A | 0.0000 | |
| 224 | G | A | 0.0000 | |
| 225 | A | A | 0.0000 | |
| 226 | D | A | 0.0000 | |
| 227 | L | A | 0.0000 | |
| 228 | V | A | 0.0000 | |
| 229 | R | A | -1.4193 | |
| 230 | L | A | 0.0000 | |
| 231 | D | A | -1.9772 | |
| 232 | G | A | -1.7186 | |
| 233 | G | A | -1.2824 | |
| 234 | A | A | 0.0000 | |
| 235 | M | A | -0.1504 | |
| 236 | C | A | 0.2266 | |
| 237 | S | A | 0.0000 | |
| 238 | P | A | 0.2153 | |
| 239 | G | A | 0.7012 | |
| 240 | F | A | 0.0000 | |
| 241 | S | A | 0.0000 | |
| 242 | C | A | 0.7241 | |
| 243 | D | A | -0.5328 | |
| 244 | S | A | -0.4502 | |
| 245 | A | A | 0.0000 | |
| 246 | L | A | 0.0000 | |
| 247 | Q | A | -0.2599 | |
| 248 | V | A | 0.0000 | |
| 249 | T | A | 0.0000 | |
| 250 | Y | A | 0.0000 | |
| 251 | I | A | 0.0000 | |
| 252 | V | A | 0.0000 | |
| 253 | R | A | -2.6860 | |
| 254 | G | A | -2.3595 | |
| 255 | S | A | -2.3473 | |
| 256 | G | A | 0.0000 | |
| 257 | R | A | -2.7260 | |
| 258 | V | A | 0.0000 | |
| 259 | Q | A | -1.6873 | |
| 260 | V | A | 0.0000 | |
| 261 | V | A | -0.6622 | |
| 262 | G | A | 0.0000 | |
| 263 | I | A | 0.9160 | |
| 264 | D | A | -1.6063 | |
| 265 | G | A | -1.6609 | |
| 266 | K | A | -2.6387 | |
| 267 | R | A | -2.6893 | |
| 268 | V | A | -1.4198 | |
| 269 | L | A | 0.0000 | |
| 270 | E | A | -2.6379 | |
| 271 | T | A | -1.8738 | |
| 272 | H | A | -2.2183 | |
| 273 | V | A | 0.0000 | |
| 274 | K | A | -2.6765 | |
| 275 | A | A | -1.5350 | |
| 276 | G | A | -0.5574 | |
| 277 | N | A | -0.5378 | |
| 278 | L | A | 0.0000 | |
| 279 | F | A | 0.0000 | |
| 280 | I | A | 0.0000 | |
| 281 | V | A | 0.0000 | |
| 282 | P | A | -0.2138 | |
| 283 | R | A | -0.5619 | |
| 284 | F | A | 1.7051 | |
| 285 | F | A | 0.9490 | |
| 286 | V | A | 0.8602 | |
| 287 | V | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | K | A | 0.0000 | |
| 290 | I | A | -0.5212 | |
| 291 | G | A | 0.0000 | |
| 292 | D | A | -1.9627 | |
| 293 | P | A | -1.5947 | |
| 294 | D | A | -2.5721 | |
| 295 | G | A | 0.0000 | |
| 296 | M | A | 0.0000 | |
| 297 | E | A | -1.6798 | |
| 298 | W | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | S | A | 0.0000 | |
| 301 | I | A | 0.0000 | |
| 302 | I | A | 0.0000 | |
| 303 | T | A | -0.5114 | |
| 304 | T | A | -0.3778 | |
| 305 | P | A | -0.9073 | |
| 306 | N | A | -0.6721 | |
| 307 | P | A | 0.5275 | |
| 308 | I | A | 1.9090 | |
| 309 | F | A | 1.5301 | |
| 310 | T | A | 1.0541 | |
| 311 | H | A | 0.3939 | |
| 312 | L | A | 0.3195 | |
| 313 | A | A | -0.5951 | |
| 314 | G | A | 0.0000 | |
| 315 | R | A | -2.5527 | |
| 316 | T | A | -1.0255 | |
| 317 | S | A | 0.0000 | |
| 318 | A | A | 0.2814 | |
| 319 | W | A | 0.6569 | |
| 320 | K | A | -0.5137 | |
| 321 | A | A | 0.1033 | |
| 322 | L | A | 0.8032 | |
| 323 | S | A | 0.1755 | |
| 324 | P | A | -0.7613 | |
| 325 | E | A | -1.1496 | |
| 326 | V | A | 0.7641 | |
| 327 | L | A | 0.0000 | |
| 328 | Q | A | -0.8582 | |
| 329 | A | A | -0.3140 | |
| 330 | A | A | 0.1447 | |
| 331 | F | A | 0.2580 | |
| 332 | K | A | -1.0934 | |
| 333 | V | A | -0.6238 | |
| 334 | T | A | -1.0931 | |
| 335 | P | A | -1.6670 | |
| 336 | D | A | -1.9038 | |
| 337 | L | A | -0.4783 | |
| 338 | E | A | 0.0000 | |
| 339 | K | A | -2.1303 | |
| 340 | A | A | -0.8279 | |
| 341 | F | A | 0.2222 | |
| 342 | R | A | -1.2046 | |
| 343 | S | A | -1.6396 | |
| 344 | K | A | -2.5655 | |
| 345 | R | A | -2.4950 | |
| 346 | T | A | -2.1577 | |
| 347 | A | A | -1.3236 | |
| 348 | D | A | -1.4837 | |
| 349 | A | A | -0.8505 | |
| 350 | I | A | -0.2142 | |
| 351 | F | A | 0.0000 | |
| 352 | F | A | 0.0000 | |
| 353 | P | A | -1.2835 | |
| 354 | P | A | -0.9019 | |
| 355 | P | A | -0.8965 | |
| 356 | N | A | -1.4164 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine