| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGITFSIYRMAWFRQAPGKGLEGVSVIESGGGNTKYADSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCAVRLPSSTSSWIWGSSLAPWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LS121A,IT31A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 2.83435 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:02:18)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:38)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:42)
[INFO] Main: Simulation completed successfully. (00:03:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1015 | |
| 2 | V | A | -1.3112 | |
| 3 | Q | A | -1.3528 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.8932 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.3416 | |
| 8 | G | A | -0.7571 | |
| 9 | G | A | -0.4349 | |
| 10 | G | A | 0.2152 | |
| 11 | L | A | 1.0489 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.4064 | |
| 14 | P | A | -1.6885 | |
| 15 | G | A | -1.4183 | |
| 16 | G | A | -1.0002 | |
| 17 | S | A | -1.1688 | |
| 18 | L | A | -1.0485 | |
| 19 | R | A | -2.1832 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4246 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1802 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0111 | |
| 26 | G | A | -1.2436 | |
| 27 | I | A | -0.4590 | |
| 28 | T | A | -0.1162 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.7882 | |
| 31 | T | A | -0.3091 | mutated: IT31A |
| 32 | Y | A | -0.1264 | |
| 33 | R | A | -0.8503 | |
| 34 | M | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.1147 | |
| 40 | A | A | 0.0000 | |
| 41 | P | A | -1.2818 | |
| 42 | G | A | -1.5334 | |
| 43 | K | A | -2.3758 | |
| 44 | G | A | -1.5373 | |
| 45 | L | A | -0.6216 | |
| 46 | E | A | -1.2346 | |
| 47 | G | A | -0.3483 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | E | A | -1.5523 | |
| 53 | S | A | -1.1369 | |
| 54 | G | A | -1.3030 | |
| 55 | G | A | -1.4897 | |
| 56 | G | A | -1.5975 | |
| 57 | N | A | -2.0382 | |
| 58 | T | A | -1.3889 | |
| 59 | K | A | -1.6075 | |
| 60 | Y | A | -1.4353 | |
| 61 | A | A | -1.7161 | |
| 62 | D | A | -2.6925 | |
| 63 | S | A | -1.8402 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.8239 | |
| 66 | G | A | -1.8018 | |
| 67 | R | A | -1.5269 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -1.0446 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.6267 | |
| 72 | R | A | -1.0040 | |
| 73 | D | A | -1.4129 | |
| 74 | N | A | -1.4589 | |
| 75 | A | A | -1.2231 | |
| 76 | K | A | -2.1351 | |
| 77 | N | A | -1.5087 | |
| 78 | T | A | -0.8075 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.6171 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.4215 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.4740 | |
| 85 | S | A | -1.2506 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.2548 | |
| 88 | A | A | -1.7223 | |
| 89 | E | A | -2.2654 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.7473 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.0858 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.2884 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | R | A | 0.0000 | |
| 100 | L | A | 0.6268 | |
| 101 | P | A | -0.2708 | |
| 102 | S | A | -0.3655 | |
| 103 | S | A | -0.4190 | |
| 104 | T | A | -0.2633 | |
| 105 | S | A | -0.2082 | |
| 106 | S | A | 0.2578 | |
| 107 | W | A | 0.7075 | |
| 108 | I | A | 1.4500 | |
| 109 | W | A | 0.8183 | |
| 110 | G | A | 0.2862 | |
| 111 | S | A | 0.5499 | |
| 112 | S | A | 0.8601 | |
| 113 | L | A | 1.5879 | |
| 114 | A | A | 0.9601 | |
| 115 | P | A | 0.1632 | |
| 116 | W | A | 0.4357 | |
| 117 | G | A | -0.1668 | |
| 118 | Q | A | -0.8636 | |
| 119 | G | A | 0.0000 | |
| 120 | T | A | -0.1539 | |
| 121 | S | A | -0.1212 | mutated: LS121A |
| 122 | V | A | 0.0000 | |
| 123 | T | A | -0.1100 | |
| 124 | V | A | 0.0000 | |
| 125 | S | A | -0.8424 |