| Chain sequence(s) |
A: LQVDIVPSQGEISVGESKFFLCQVAGWTQPFIQSWFSPNGEKLTPNQQRISVVWNDDSSSTLTIYNANIDDAGIYKCVVSLRPYWYSGTLQVEATVNVKIFQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.0900 | |
| 2 | Q | A | -1.2571 | |
| 3 | V | A | 0.0000 | |
| 4 | D | A | -1.3849 | |
| 5 | I | A | 0.0000 | |
| 6 | V | A | 0.6304 | |
| 7 | P | A | 0.0966 | |
| 8 | S | A | -0.8335 | |
| 9 | Q | A | -1.9346 | |
| 10 | G | A | 0.0000 | |
| 11 | E | A | -2.7181 | |
| 12 | I | A | 0.0000 | |
| 13 | S | A | -1.1121 | |
| 14 | V | A | -0.2088 | |
| 15 | G | A | -1.3706 | |
| 16 | E | A | -2.4037 | |
| 17 | S | A | -1.1840 | |
| 18 | K | A | -0.5510 | |
| 19 | F | A | 1.8379 | |
| 20 | F | A | 0.0000 | |
| 21 | L | A | 0.7958 | |
| 22 | C | A | 0.0000 | |
| 23 | Q | A | -1.3698 | |
| 24 | V | A | 0.0000 | |
| 25 | A | A | -0.5770 | |
| 26 | G | A | -0.3528 | |
| 27 | W | A | -0.0444 | |
| 28 | T | A | -0.3027 | |
| 29 | Q | A | -0.5921 | |
| 30 | P | A | -0.4189 | |
| 31 | F | A | 0.3161 | |
| 32 | I | A | 1.4788 | |
| 33 | Q | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | F | A | -1.3341 | |
| 37 | S | A | -1.3469 | |
| 38 | P | A | -1.3232 | |
| 39 | N | A | -2.0870 | |
| 40 | G | A | -2.2272 | |
| 41 | E | A | -3.2135 | |
| 42 | K | A | -2.7612 | |
| 43 | L | A | -1.6626 | |
| 44 | T | A | -1.2198 | |
| 45 | P | A | -0.9223 | |
| 46 | N | A | -2.2528 | |
| 47 | Q | A | -2.5810 | |
| 48 | Q | A | -2.4676 | |
| 49 | R | A | -1.9294 | |
| 50 | I | A | 0.0000 | |
| 51 | S | A | -0.4195 | |
| 52 | V | A | 0.0000 | |
| 53 | V | A | 0.9249 | |
| 54 | W | A | -0.1480 | |
| 55 | N | A | -1.7764 | |
| 56 | D | A | -2.9739 | |
| 57 | D | A | -2.6843 | |
| 58 | S | A | -1.6255 | |
| 59 | S | A | -1.4181 | |
| 60 | S | A | 0.0000 | |
| 61 | T | A | 0.7759 | |
| 62 | L | A | 0.0000 | |
| 63 | T | A | 0.7949 | |
| 64 | I | A | 0.0000 | |
| 65 | Y | A | -0.8648 | |
| 66 | N | A | -2.1151 | |
| 67 | A | A | 0.0000 | |
| 68 | N | A | -1.2843 | |
| 69 | I | A | -0.1125 | |
| 70 | D | A | -1.6276 | |
| 71 | D | A | 0.0000 | |
| 72 | A | A | -0.8613 | |
| 73 | G | A | -0.4337 | |
| 74 | I | A | 0.2202 | |
| 75 | Y | A | 0.0000 | |
| 76 | K | A | -1.1605 | |
| 77 | C | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | S | A | -0.1507 | |
| 81 | L | A | 0.0000 | |
| 82 | R | A | -1.1114 | |
| 83 | P | A | 0.0000 | |
| 84 | Y | A | 1.5748 | |
| 85 | W | A | 1.8232 | |
| 86 | Y | A | 1.1918 | |
| 87 | S | A | 0.2941 | |
| 88 | G | A | -0.1656 | |
| 89 | T | A | -0.6995 | |
| 90 | L | A | -0.3673 | |
| 91 | Q | A | -1.0789 | |
| 92 | V | A | -1.0682 | |
| 93 | E | A | -2.1018 | |
| 94 | A | A | -1.3674 | |
| 95 | T | A | -0.7731 | |
| 96 | V | A | 0.0000 | |
| 97 | N | A | -1.5154 | |
| 98 | V | A | 0.0000 | |
| 99 | K | A | -2.1316 | |
| 100 | I | A | 0.0000 | |
| 101 | F | A | -0.3368 | |
| 102 | Q | A | -0.4530 |