| Chain sequence(s) |
L: KPVVFLDNTGYWNIAD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 93 | K | L | -1.7457 | |
| 94 | P | L | -0.2392 | |
| 95 | V | L | 2.0489 | |
| 96 | V | L | 2.4531 | |
| 97 | F | L | 2.4218 | |
| 98 | L | L | 1.1199 | |
| 99 | D | L | -0.3754 | |
| 100 | N | L | -1.3403 | |
| 101 | T | L | -0.3392 | |
| 102 | G | L | 0.0230 | |
| 103 | Y | L | 1.4929 | |
| 104 | W | L | 1.3930 | |
| 105 | N | L | 0.3259 | |
| 106 | I | L | 0.9360 | |
| 107 | A | L | -0.1292 | |
| 108 | D | L | -1.7867 |