| Chain sequence(s) |
A: GIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGRKCCRRKK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:39)
[INFO] Main: Simulation completed successfully. (00:01:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.8628 | |
| 2 | I | A | 2.4593 | |
| 3 | I | A | 2.2965 | |
| 4 | N | A | 0.0516 | |
| 5 | T | A | -0.0771 | |
| 6 | L | A | -0.3766 | |
| 7 | Q | A | -2.0063 | |
| 8 | K | A | -2.0305 | |
| 9 | Y | A | -0.7364 | |
| 10 | Y | A | -0.6797 | |
| 11 | C | A | -1.8070 | |
| 12 | R | A | -1.7937 | |
| 13 | V | A | -0.3445 | |
| 14 | R | A | -1.7253 | |
| 15 | G | A | -2.0492 | |
| 16 | G | A | -2.2971 | |
| 17 | R | A | -1.9503 | |
| 18 | C | A | -0.3044 | |
| 19 | A | A | 0.0000 | |
| 20 | V | A | 2.2002 | |
| 21 | L | A | 1.6819 | |
| 22 | S | A | 0.6474 | |
| 23 | C | A | -0.4425 | |
| 24 | L | A | -0.8793 | |
| 25 | P | A | -1.6747 | |
| 26 | K | A | -3.2215 | |
| 27 | E | A | 0.0000 | |
| 28 | E | A | -3.2746 | |
| 29 | Q | A | -2.7990 | |
| 30 | I | A | 0.0000 | |
| 31 | G | A | 0.0000 | |
| 32 | K | A | -3.2743 | |
| 33 | C | A | -1.9836 | |
| 34 | S | A | -1.4488 | |
| 35 | T | A | -2.0346 | |
| 36 | R | A | -2.5859 | |
| 37 | G | A | -1.4053 | |
| 38 | R | A | -1.2165 | |
| 39 | K | A | -1.9826 | |
| 40 | C | A | 0.0000 | |
| 41 | C | A | 0.0000 | |
| 42 | R | A | -4.0400 | |
| 43 | R | A | -4.7714 | |
| 44 | K | A | -4.3790 | |
| 45 | K | A | -3.2948 |