| Chain sequence(s) |
A: CANMVNMGPVANMVNMGPVANMVNMGPVCANMVNMGPV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.6878 | |
| 2 | A | A | 0.5296 | |
| 3 | N | A | -0.5838 | |
| 4 | M | A | 0.5744 | |
| 5 | V | A | 1.2398 | |
| 6 | N | A | -0.0512 | |
| 7 | M | A | 0.9703 | |
| 8 | G | A | 0.4363 | |
| 9 | P | A | 0.4393 | |
| 10 | V | A | 1.6245 | |
| 11 | A | A | 0.9344 | |
| 12 | N | A | -0.1456 | |
| 13 | M | A | 0.9408 | |
| 14 | V | A | 1.3634 | |
| 15 | N | A | -0.0186 | |
| 16 | M | A | 0.8574 | |
| 17 | G | A | 0.4525 | |
| 18 | P | A | 0.6191 | |
| 19 | V | A | 1.6831 | |
| 20 | A | A | 0.7899 | |
| 21 | N | A | -0.0598 | |
| 22 | M | A | 1.1964 | |
| 23 | V | A | 1.3818 | |
| 24 | N | A | -0.0404 | |
| 25 | M | A | 0.5370 | |
| 26 | G | A | -0.1000 | |
| 27 | P | A | 0.2135 | |
| 28 | V | A | 1.0415 | |
| 29 | C | A | 1.0469 | |
| 30 | A | A | 0.5696 | |
| 31 | N | A | -0.2043 | |
| 32 | M | A | 0.9083 | |
| 33 | V | A | 1.2383 | |
| 34 | N | A | -0.1130 | |
| 35 | M | A | 1.1728 | |
| 36 | G | A | 0.3645 | |
| 37 | P | A | 0.5567 | |
| 38 | V | A | 1.7661 |