Project name: query_structure

Status: done

Started: 2026-03-16 20:45:11
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Chain sequence(s) D: DLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSK
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:22)
Show buried residues

Minimal score value
-4.1363
Maximal score value
2.2528
Average score
-0.7255
Total score value
-64.5692

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
7 D D -0.7741
8 L D 1.2296
9 I D 2.2528
10 F D 1.1654
11 C D -0.2322
12 R D -1.3674
13 K D -2.4572
14 Q D -2.8842
15 A D -2.0069
16 G D -0.6543
17 V D 1.1875
18 A D -0.0182
19 I D 0.0508
20 G D 0.0000
21 R D -0.9984
22 L D 0.0000
23 C D 0.0000
24 E D -2.4984
25 K D -2.6234
26 C D -1.6713
27 D D -1.9378
28 G D -1.6128
29 K D -1.0197
30 C D 0.0000
31 V D 0.0000
32 I D -0.0041
33 C D -0.3916
34 D D -1.2592
35 S D -0.7301
36 Y D 0.2133
37 V D -0.6205
38 R D -1.9454
39 P D -0.9570
40 C D -0.4878
41 T D -0.0782
42 L D 0.4709
43 V D 0.0000
44 R D -1.1957
45 I D 0.0000
46 C D 0.0000
47 D D -2.6339
48 E D -2.6315
49 C D 0.0000
50 N D -1.0855
51 Y D -0.2518
52 G D -0.3448
53 S D -0.1759
54 Y D -0.0851
55 Q D -1.3120
56 G D -0.8312
57 R D -0.8818
58 C D 0.0000
59 V D 0.0000
60 I D 0.3125
61 C D 0.5154
62 G D 0.0636
63 G D -0.5095
64 P D -0.7517
65 G D -0.8470
66 V D 0.3450
67 S D -0.3856
68 D D -0.7789
69 A D 0.0000
70 Y D -0.1054
71 Y D 0.0000
72 C D 0.0000
73 K D -1.8858
74 E D -1.9528
75 C D 0.0000
76 T D -1.3799
77 I D -0.0400
78 Q D -2.1119
79 E D -3.4678
80 K D -3.2137
81 D D -2.8434
82 R D -4.1363
83 D D -3.7739
84 G D -2.6731
85 C D 0.0000
86 P D 0.0000
87 K D 0.1666
88 I D 1.5626
89 V D 1.1909
90 N D 0.0009
91 L D 0.8913
92 G D -0.6074
93 S D -0.9761
94 S D -1.1532
95 K D -1.9355
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Laboratory of Theory of Biopolymers 2018