| Chain sequence(s) |
H: EVQLVESGGDLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSFISDSSSNIYYADSVKGRFTISRDNAKKSLYLQMTSLRAEDTAVYYCAREAIGSTSFDNWGQGTLVTVSS
L: EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRRLIYSASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAIYYCHQYNNWPLTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.8689 | |
| 2 | V | H | -0.8807 | |
| 3 | Q | H | -0.7704 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2044 | |
| 6 | E | H | 0.4435 | |
| 7 | S | H | -0.3453 | |
| 8 | G | H | -0.8606 | |
| 9 | G | H | -0.5100 | |
| 11 | D | H | -0.8739 | |
| 12 | L | H | 0.6312 | |
| 13 | V | H | -0.4298 | |
| 14 | Q | H | -1.3276 | |
| 15 | P | H | -1.5593 | |
| 16 | G | H | -1.3075 | |
| 17 | G | H | -1.0283 | |
| 18 | S | H | -0.8334 | |
| 19 | L | H | -0.8565 | |
| 20 | R | H | -1.5534 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2663 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1054 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.6032 | |
| 27 | G | H | -1.0120 | |
| 28 | F | H | -0.4524 | |
| 29 | T | H | -0.3575 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.1088 | |
| 36 | S | H | -0.3040 | |
| 37 | Y | H | 0.0298 | |
| 38 | E | H | -0.4265 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6233 | |
| 45 | A | H | -1.0324 | |
| 46 | P | H | -0.8095 | |
| 47 | G | H | -1.4822 | |
| 48 | K | H | -2.2587 | |
| 49 | G | H | -1.3508 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8876 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | F | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | -0.8424 | |
| 58 | D | H | -1.4513 | |
| 59 | S | H | -1.0354 | |
| 62 | S | H | -0.8867 | |
| 63 | S | H | -0.7418 | |
| 64 | N | H | -0.8023 | |
| 65 | I | H | 0.4496 | |
| 66 | Y | H | 0.2937 | |
| 67 | Y | H | -0.4776 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.6480 | |
| 70 | S | H | -1.7456 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5391 | |
| 74 | G | H | -1.6468 | |
| 75 | R | H | -1.3043 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6392 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2940 | |
| 80 | R | H | -1.0787 | |
| 81 | D | H | -1.5667 | |
| 82 | N | H | -1.8325 | |
| 83 | A | H | -1.4186 | |
| 84 | K | H | -2.3670 | |
| 85 | K | H | -1.9679 | |
| 86 | S | H | -1.0895 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4710 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0896 | |
| 91 | M | H | 0.0000 | |
| 92 | T | H | -0.8748 | |
| 93 | S | H | -0.9694 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2039 | |
| 96 | A | H | -1.6980 | |
| 97 | E | H | -2.2305 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.5168 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7621 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | E | H | 0.0000 | |
| 108 | A | H | 0.0000 | |
| 109 | I | H | 1.6675 | |
| 110 | G | H | 0.4664 | |
| 112 | S | H | 0.3038 | |
| 113 | T | H | 0.1682 | |
| 114 | S | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.6335 | |
| 117 | N | H | -0.9188 | |
| 118 | W | H | -0.6345 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0330 | |
| 121 | G | H | -0.0556 | |
| 122 | T | H | 0.3056 | |
| 123 | L | H | 1.1323 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0794 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7516 | |
| 128 | S | H | -0.6861 | |
| 1 | E | L | -1.8211 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7153 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.6263 | |
| 6 | Q | L | -0.6658 | |
| 7 | S | L | -0.6506 | |
| 8 | P | L | -0.4504 | |
| 9 | A | L | -0.4080 | |
| 10 | T | L | -0.4956 | |
| 11 | L | L | -0.1725 | |
| 12 | S | L | -0.2659 | |
| 13 | V | L | -0.7884 | |
| 14 | S | L | -1.2901 | |
| 15 | P | L | -1.6621 | |
| 16 | G | L | -2.2145 | |
| 17 | E | L | -3.1875 | |
| 18 | R | L | -2.9593 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.5462 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.9322 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.4283 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.0534 | |
| 27 | Q | L | -1.7452 | |
| 28 | S | L | -1.4644 | |
| 29 | V | L | 0.0000 | |
| 36 | S | L | -0.8401 | |
| 37 | S | L | -0.6361 | |
| 38 | S | L | -0.4820 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.2618 | |
| 46 | P | L | -0.9715 | |
| 47 | G | L | -1.3504 | |
| 48 | Q | L | -1.9012 | |
| 49 | A | L | -1.3693 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.5486 | |
| 52 | R | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.0867 | |
| 56 | S | L | -0.2704 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.6083 | |
| 66 | T | L | -0.5398 | |
| 67 | R | L | -0.9760 | |
| 68 | A | L | -0.7463 | |
| 69 | T | L | -0.5564 | |
| 70 | G | L | -0.6353 | |
| 71 | I | L | 0.0000 | |
| 72 | P | L | -0.4218 | |
| 74 | A | L | -0.3806 | |
| 75 | R | L | -0.7805 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.5851 | |
| 78 | G | L | -0.5211 | |
| 79 | S | L | -0.7199 | |
| 80 | G | L | -1.1588 | |
| 83 | S | L | -1.1518 | |
| 84 | G | L | -1.2984 | |
| 85 | T | L | -1.8847 | |
| 86 | E | L | -2.3699 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8467 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6271 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.5698 | |
| 93 | S | L | -2.0601 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.9718 | |
| 96 | S | L | -1.0124 | |
| 97 | E | L | -1.3833 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2499 | |
| 100 | A | L | 0.0000 | |
| 101 | I | L | -0.2904 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | H | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | -0.3303 | |
| 108 | N | L | -0.9531 | |
| 109 | N | L | -1.2278 | |
| 114 | W | L | -0.3112 | |
| 115 | P | L | -0.7090 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.1235 | |
| 118 | F | L | 0.1911 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.7704 | |
| 121 | G | L | -0.7499 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.1379 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.0343 | |
| 126 | I | L | 0.9987 | |
| 127 | K | L | -0.8453 |