| Chain sequence(s) |
A: GGGQVTTESNLVEFDEESTKGIVTGAVSDHTTVEDTK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:21)
[INFO] Main: Simulation completed successfully. (00:00:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | G | A | -0.9478 | |
| 3 | G | A | -1.0166 | |
| 4 | G | A | -0.9080 | |
| 5 | Q | A | -0.7756 | |
| 6 | V | A | 0.7199 | |
| 7 | T | A | -0.1695 | |
| 8 | T | A | -0.7208 | |
| 9 | E | A | -1.8538 | |
| 10 | S | A | -0.9788 | |
| 11 | N | A | -0.8203 | |
| 12 | L | A | 1.1911 | |
| 13 | V | A | 1.5942 | |
| 14 | E | A | -0.4116 | |
| 15 | F | A | 0.0868 | |
| 16 | D | A | -2.5220 | |
| 17 | E | A | -3.4795 | |
| 18 | E | A | -3.2494 | |
| 19 | S | A | -2.2671 | |
| 20 | T | A | -1.5942 | |
| 21 | K | A | -1.7515 | |
| 22 | G | A | 0.0753 | |
| 23 | I | A | 2.1845 | |
| 24 | V | A | 2.2687 | |
| 25 | T | A | 1.2668 | |
| 26 | G | A | 0.6223 | |
| 27 | A | A | 0.6159 | |
| 28 | V | A | 1.0206 | |
| 29 | S | A | -0.6150 | |
| 30 | D | A | -1.9814 | |
| 31 | H | A | -1.5075 | |
| 32 | T | A | -0.8346 | |
| 33 | T | A | -0.5964 | |
| 34 | V | A | 0.1874 | |
| 35 | E | A | -2.1057 | |
| 36 | D | A | -2.7191 | |
| 37 | T | A | -2.0928 | |
| 38 | K | A | -2.5017 |