| Chain sequence(s) |
H: EVQLVQSGAEVKKPGESLKISCKGSGYSFSNYWIGWVRQMPGKGLEWMGIIDPSNSYTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARWYYKPFDVWGQGTLVTVSS
L: QSVLTQPPSVSGAPGQRVTISCTGSSSNIGSGYDVHWYQQLPGTAPKLLIYGNSKRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYYCASWTDGLSLVVFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:49)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9003 | |
| 2 | V | H | -0.7871 | |
| 3 | Q | H | -1.3118 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.1236 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.4554 | |
| 8 | G | H | -0.5188 | |
| 9 | A | H | 0.1645 | |
| 11 | E | H | 0.2848 | |
| 12 | V | H | 1.1147 | |
| 13 | K | H | -0.7854 | |
| 14 | K | H | -2.1336 | |
| 15 | P | H | -1.8934 | |
| 16 | G | H | -1.7284 | |
| 17 | E | H | -1.9575 | |
| 18 | S | H | -1.4298 | |
| 19 | L | H | 0.0000 | |
| 20 | K | H | -1.2951 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.3980 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.6996 | |
| 25 | G | H | 0.0000 | |
| 26 | S | H | -0.6824 | |
| 27 | G | H | -1.0684 | |
| 28 | Y | H | -0.6126 | |
| 29 | S | H | -0.6863 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.4422 | |
| 36 | N | H | -1.1161 | |
| 37 | Y | H | 0.1014 | |
| 38 | W | H | 0.5079 | |
| 39 | I | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5609 | |
| 45 | M | H | -0.5280 | |
| 46 | P | H | -0.7919 | |
| 47 | G | H | -1.3396 | |
| 48 | K | H | -2.0939 | |
| 49 | G | H | -1.3302 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7693 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | I | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | -0.5370 | |
| 58 | P | H | 0.0000 | |
| 59 | S | H | -1.3220 | |
| 62 | N | H | -1.4013 | |
| 63 | S | H | -0.6835 | |
| 64 | Y | H | 0.5811 | |
| 65 | T | H | 0.1237 | |
| 66 | R | H | -0.3775 | |
| 67 | Y | H | -0.6983 | |
| 68 | S | H | 0.0000 | |
| 69 | P | H | -0.9315 | |
| 70 | S | H | -1.0336 | |
| 71 | F | H | 0.0000 | |
| 72 | Q | H | -1.9362 | |
| 74 | G | H | -1.6522 | |
| 75 | Q | H | -1.9296 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.8550 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3659 | |
| 80 | A | H | -0.7517 | |
| 81 | D | H | -1.3208 | |
| 82 | K | H | -1.9807 | |
| 83 | S | H | -0.4411 | |
| 84 | I | H | 0.6708 | |
| 85 | S | H | -0.4959 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3989 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0980 | |
| 91 | W | H | 0.0000 | |
| 92 | S | H | -1.0351 | |
| 93 | S | H | -1.3747 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -1.3447 | |
| 96 | A | H | -0.8579 | |
| 97 | S | H | -0.4036 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.0707 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | 0.2848 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | W | H | 0.5003 | |
| 108 | Y | H | 1.0013 | |
| 109 | Y | H | 1.1428 | |
| 113 | K | H | -0.4109 | |
| 114 | P | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.1635 | |
| 117 | V | H | -0.1370 | |
| 118 | W | H | -0.2737 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.9973 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 0.5550 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2868 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7224 | |
| 128 | S | H | -1.0290 | |
| 1 | Q | L | -1.1650 | |
| 2 | S | L | -0.5871 | |
| 3 | V | L | 0.2659 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.1592 | |
| 6 | Q | L | -0.4283 | |
| 7 | P | L | -0.4813 | |
| 8 | P | L | -0.6941 | |
| 9 | S | L | -0.6065 | |
| 11 | V | L | -0.1607 | |
| 12 | S | L | -0.1580 | |
| 13 | G | L | 0.0000 | |
| 14 | A | L | -0.2605 | |
| 15 | P | L | -0.9577 | |
| 16 | G | L | -1.7234 | |
| 17 | Q | L | -2.2709 | |
| 18 | R | L | -2.5563 | |
| 19 | V | L | -1.0730 | |
| 20 | T | L | -0.4084 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.2806 | |
| 23 | C | L | 0.0000 | |
| 24 | T | L | -0.2427 | |
| 25 | G | L | -0.1706 | |
| 26 | S | L | -0.2772 | |
| 27 | S | L | -0.5863 | |
| 28 | S | L | -0.5405 | |
| 29 | N | L | 0.0000 | |
| 30 | I | L | 0.0000 | |
| 31 | G | L | -0.8737 | |
| 35 | S | L | -0.7385 | |
| 36 | G | L | -0.6072 | |
| 37 | Y | L | -0.3609 | |
| 38 | D | L | -0.5101 | |
| 39 | V | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.6502 | |
| 45 | L | L | -0.5737 | |
| 46 | P | L | -0.4971 | |
| 47 | G | L | -0.5245 | |
| 48 | T | L | -0.5956 | |
| 49 | A | L | -0.6159 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.9866 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.6318 | |
| 56 | G | L | -0.8083 | |
| 57 | N | L | -0.9163 | |
| 65 | S | L | -1.2944 | |
| 66 | K | L | -2.0917 | |
| 67 | R | L | -2.0083 | |
| 68 | P | L | -1.0157 | |
| 69 | S | L | -0.8201 | |
| 70 | G | L | -0.8613 | |
| 71 | V | L | -1.0542 | |
| 72 | P | L | -1.3051 | |
| 74 | D | L | -2.1516 | |
| 75 | R | L | -1.4688 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.1187 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.8331 | |
| 80 | K | L | -1.0165 | |
| 83 | S | L | -0.8096 | |
| 84 | G | L | -0.9351 | |
| 85 | T | L | -0.7552 | |
| 86 | S | L | -0.6214 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | -0.4198 | |
| 89 | L | L | 0.0000 | |
| 90 | A | L | -0.5054 | |
| 91 | I | L | 0.0000 | |
| 92 | T | L | -1.7808 | |
| 93 | G | L | -1.7170 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.6051 | |
| 96 | S | L | -1.3847 | |
| 97 | E | L | -2.2604 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -1.4580 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -0.9247 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | A | L | 0.0000 | |
| 106 | S | L | 0.0000 | |
| 107 | W | L | -0.2289 | |
| 108 | T | L | 0.0000 | |
| 109 | D | L | -1.2356 | |
| 110 | G | L | -0.7542 | |
| 113 | L | L | -0.0068 | |
| 114 | S | L | -0.4453 | |
| 115 | L | L | 0.0000 | |
| 116 | V | L | 0.0000 | |
| 117 | V | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0764 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.2184 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | -0.0048 | |
| 126 | V | L | 0.0298 | |
| 127 | L | L | 1.2896 |