Project name: 18b7705fc4b431e

Status: done

Started: 2024-07-26 08:56:17
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Chain sequence(s) H: QVQLKESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLRIIKDNSKSQVFLKMNSLQTDDTAMYYCAKDWGPYYAMDYWGQGTSVTVSS
L: QIVLTQSPAVMSASLGEEITLTCSASSSVYFMHWYQQKSGTSPKLLIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAADYYCHQWSGYLTFGGGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:58)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:59)
Show buried residues

Minimal score value
-2.5181
Maximal score value
1.5852
Average score
-0.431
Total score value
-96.1218

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4745
2 V H -1.0600
3 Q H -1.8368
4 L H 0.0000
5 K H -2.0679
6 E H 0.0000
7 S H -0.8648
8 G H -0.3494
9 P H -0.0729
11 G H 0.2641
12 L H 1.2310
13 V H 0.0000
14 A H -0.3852
15 P H -1.0357
16 S H -1.4354
17 Q H -1.8585
18 S H -1.6913
19 L H 0.0000
20 S H -1.0171
21 I H 0.0000
22 T H -0.3904
23 C H 0.0000
24 T H -1.1725
25 V H 0.0000
26 S H -1.3766
27 G H -1.1008
28 F H -0.7841
29 S H -1.0875
30 L H 0.0000
35 S H -1.5455
36 R H -1.9089
37 Y H -0.5967
38 S H 0.0000
39 V H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6903
45 P H 0.0000
46 P H -1.0776
47 G H -1.2414
48 K H -1.7991
49 G H -1.2111
50 L H 0.0000
51 E H -0.7880
52 W H 0.0000
53 L H 0.0000
54 G H 0.0000
55 M H 0.0000
56 I H 0.0000
57 W H -0.3323
58 G H -1.1285
59 G H -0.8895
63 G H -0.6318
64 S H -0.3500
65 T H -0.4931
66 D H -0.7848
67 Y H 0.0000
68 N H -0.7726
69 S H -0.8118
70 A H -0.5646
71 L H 0.0000
72 K H -1.6579
74 S H -1.3592
75 R H -1.7875
76 L H 0.0000
77 R H -2.4573
78 I H 0.0000
79 I H -0.0399
80 K H -0.7454
81 D H -1.7185
82 N H -2.3892
83 S H -1.9096
84 K H -2.5181
85 S H -1.8212
86 Q H -1.4314
87 V H 0.0000
88 F H -0.0899
89 L H 0.0000
90 K H -1.7591
91 M H 0.0000
92 N H -2.5104
93 S H -1.6115
94 L H 0.0000
95 Q H -2.2301
96 T H -1.6053
97 D H -2.2465
98 D H 0.0000
99 T H -0.7595
100 A H 0.0000
101 M H -0.0039
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 D H 0.0000
108 W H 0.9437
109 G H 0.1470
110 P H 0.2082
112 Y H 0.6157
113 Y H 0.8381
114 A H 0.0000
115 M H 0.0000
116 D H 0.2243
117 Y H 0.0828
118 W H -0.4765
119 G H 0.0000
120 Q H -1.6968
121 G H -0.9294
122 T H -0.6870
123 S H -0.1846
124 V H 0.0000
125 T H 0.0186
126 V H 0.0000
127 S H -0.3435
128 S H -0.1062
1 Q L -0.6600
2 I L 0.4668
3 V L 1.3933
4 L L 0.0000
5 T L 0.3610
6 Q L 0.0000
7 S L -0.2075
8 P L 0.0050
9 A L 0.1785
10 V L 0.5376
11 M L -0.0708
12 S L -0.9837
13 A L 0.0000
14 S L -1.0701
15 L L 0.0163
16 G L -1.0724
17 E L -2.1085
18 E L -2.3792
19 I L 0.0000
20 T L -0.4736
21 L L 0.0000
22 T L 0.1587
23 C L 0.0000
24 S L 0.7170
25 A L 0.0000
26 S L 0.3642
27 S L 0.0499
28 S L 0.1937
29 V L 0.0000
37 Y L 1.4083
38 F L 1.1236
39 M L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.2089
46 S L -0.7460
47 G L -0.8642
48 T L -0.8635
49 S L -0.6844
50 P L 0.0000
51 K L -0.7476
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.2927
56 S L 0.3753
57 T L 0.0603
65 S L -0.4611
66 N L -0.6286
67 L L -0.0193
68 A L -0.2351
69 S L -0.3887
70 G L -0.5102
71 V L -0.1818
72 P L -0.2280
74 S L -0.3277
75 R L -0.7879
76 F L 0.0000
77 S L -0.3987
78 G L 0.0000
79 S L -0.2361
80 G L 0.2651
83 S L 0.4147
84 G L 0.4473
85 T L 0.7205
86 F L 1.5852
87 Y L 0.0000
88 S L 0.1594
89 L L 0.0000
90 T L -0.5863
91 I L 0.0000
92 S L -1.6503
93 S L -1.5255
94 V L 0.0000
95 E L -1.5443
96 A L -1.2084
97 E L -1.5860
98 D L 0.0000
99 A L -1.4556
100 A L 0.0000
101 D L -1.0741
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 H L 0.0000
106 Q L 0.0000
107 W L 0.7336
108 S L 0.2045
114 G L -0.1955
115 Y L -0.0384
116 L L 0.0000
117 T L 0.1995
118 F L 0.0000
119 G L 0.0000
120 G L -0.7869
121 G L -0.6966
122 T L 0.0000
123 K L -1.4364
124 L L 0.0000
125 E L -2.0429
126 L L -1.3215
127 K L -1.6806
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Laboratory of Theory of Biopolymers 2018