Chain sequence(s) |
H: QVQLKESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLRIIKDNSKSQVFLKMNSLQTDDTAMYYCAKDWGPYYAMDYWGQGTSVTVSS
L: QIVLTQSPAVMSASLGEEITLTCSASSSVYFMHWYQQKSGTSPKLLIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAADYYCHQWSGYLTFGGGTKLELK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:58) [INFO] Main: Simulation completed successfully. (00:00:59) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.4745 | |
2 | V | H | -1.0600 | |
3 | Q | H | -1.8368 | |
4 | L | H | 0.0000 | |
5 | K | H | -2.0679 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.8648 | |
8 | G | H | -0.3494 | |
9 | P | H | -0.0729 | |
11 | G | H | 0.2641 | |
12 | L | H | 1.2310 | |
13 | V | H | 0.0000 | |
14 | A | H | -0.3852 | |
15 | P | H | -1.0357 | |
16 | S | H | -1.4354 | |
17 | Q | H | -1.8585 | |
18 | S | H | -1.6913 | |
19 | L | H | 0.0000 | |
20 | S | H | -1.0171 | |
21 | I | H | 0.0000 | |
22 | T | H | -0.3904 | |
23 | C | H | 0.0000 | |
24 | T | H | -1.1725 | |
25 | V | H | 0.0000 | |
26 | S | H | -1.3766 | |
27 | G | H | -1.1008 | |
28 | F | H | -0.7841 | |
29 | S | H | -1.0875 | |
30 | L | H | 0.0000 | |
35 | S | H | -1.5455 | |
36 | R | H | -1.9089 | |
37 | Y | H | -0.5967 | |
38 | S | H | 0.0000 | |
39 | V | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.6903 | |
45 | P | H | 0.0000 | |
46 | P | H | -1.0776 | |
47 | G | H | -1.2414 | |
48 | K | H | -1.7991 | |
49 | G | H | -1.2111 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.7880 | |
52 | W | H | 0.0000 | |
53 | L | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | M | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | W | H | -0.3323 | |
58 | G | H | -1.1285 | |
59 | G | H | -0.8895 | |
63 | G | H | -0.6318 | |
64 | S | H | -0.3500 | |
65 | T | H | -0.4931 | |
66 | D | H | -0.7848 | |
67 | Y | H | 0.0000 | |
68 | N | H | -0.7726 | |
69 | S | H | -0.8118 | |
70 | A | H | -0.5646 | |
71 | L | H | 0.0000 | |
72 | K | H | -1.6579 | |
74 | S | H | -1.3592 | |
75 | R | H | -1.7875 | |
76 | L | H | 0.0000 | |
77 | R | H | -2.4573 | |
78 | I | H | 0.0000 | |
79 | I | H | -0.0399 | |
80 | K | H | -0.7454 | |
81 | D | H | -1.7185 | |
82 | N | H | -2.3892 | |
83 | S | H | -1.9096 | |
84 | K | H | -2.5181 | |
85 | S | H | -1.8212 | |
86 | Q | H | -1.4314 | |
87 | V | H | 0.0000 | |
88 | F | H | -0.0899 | |
89 | L | H | 0.0000 | |
90 | K | H | -1.7591 | |
91 | M | H | 0.0000 | |
92 | N | H | -2.5104 | |
93 | S | H | -1.6115 | |
94 | L | H | 0.0000 | |
95 | Q | H | -2.2301 | |
96 | T | H | -1.6053 | |
97 | D | H | -2.2465 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.7595 | |
100 | A | H | 0.0000 | |
101 | M | H | -0.0039 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | K | H | 0.0000 | |
107 | D | H | 0.0000 | |
108 | W | H | 0.9437 | |
109 | G | H | 0.1470 | |
110 | P | H | 0.2082 | |
112 | Y | H | 0.6157 | |
113 | Y | H | 0.8381 | |
114 | A | H | 0.0000 | |
115 | M | H | 0.0000 | |
116 | D | H | 0.2243 | |
117 | Y | H | 0.0828 | |
118 | W | H | -0.4765 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.6968 | |
121 | G | H | -0.9294 | |
122 | T | H | -0.6870 | |
123 | S | H | -0.1846 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.0186 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.3435 | |
128 | S | H | -0.1062 | |
1 | Q | L | -0.6600 | |
2 | I | L | 0.4668 | |
3 | V | L | 1.3933 | |
4 | L | L | 0.0000 | |
5 | T | L | 0.3610 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.2075 | |
8 | P | L | 0.0050 | |
9 | A | L | 0.1785 | |
10 | V | L | 0.5376 | |
11 | M | L | -0.0708 | |
12 | S | L | -0.9837 | |
13 | A | L | 0.0000 | |
14 | S | L | -1.0701 | |
15 | L | L | 0.0163 | |
16 | G | L | -1.0724 | |
17 | E | L | -2.1085 | |
18 | E | L | -2.3792 | |
19 | I | L | 0.0000 | |
20 | T | L | -0.4736 | |
21 | L | L | 0.0000 | |
22 | T | L | 0.1587 | |
23 | C | L | 0.0000 | |
24 | S | L | 0.7170 | |
25 | A | L | 0.0000 | |
26 | S | L | 0.3642 | |
27 | S | L | 0.0499 | |
28 | S | L | 0.1937 | |
29 | V | L | 0.0000 | |
37 | Y | L | 1.4083 | |
38 | F | L | 1.1236 | |
39 | M | L | 0.0000 | |
40 | H | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.2089 | |
46 | S | L | -0.7460 | |
47 | G | L | -0.8642 | |
48 | T | L | -0.8635 | |
49 | S | L | -0.6844 | |
50 | P | L | 0.0000 | |
51 | K | L | -0.7476 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.2927 | |
56 | S | L | 0.3753 | |
57 | T | L | 0.0603 | |
65 | S | L | -0.4611 | |
66 | N | L | -0.6286 | |
67 | L | L | -0.0193 | |
68 | A | L | -0.2351 | |
69 | S | L | -0.3887 | |
70 | G | L | -0.5102 | |
71 | V | L | -0.1818 | |
72 | P | L | -0.2280 | |
74 | S | L | -0.3277 | |
75 | R | L | -0.7879 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.3987 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.2361 | |
80 | G | L | 0.2651 | |
83 | S | L | 0.4147 | |
84 | G | L | 0.4473 | |
85 | T | L | 0.7205 | |
86 | F | L | 1.5852 | |
87 | Y | L | 0.0000 | |
88 | S | L | 0.1594 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.5863 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.6503 | |
93 | S | L | -1.5255 | |
94 | V | L | 0.0000 | |
95 | E | L | -1.5443 | |
96 | A | L | -1.2084 | |
97 | E | L | -1.5860 | |
98 | D | L | 0.0000 | |
99 | A | L | -1.4556 | |
100 | A | L | 0.0000 | |
101 | D | L | -1.0741 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | H | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | W | L | 0.7336 | |
108 | S | L | 0.2045 | |
114 | G | L | -0.1955 | |
115 | Y | L | -0.0384 | |
116 | L | L | 0.0000 | |
117 | T | L | 0.1995 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.7869 | |
121 | G | L | -0.6966 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.4364 | |
124 | L | L | 0.0000 | |
125 | E | L | -2.0429 | |
126 | L | L | -1.3215 | |
127 | K | L | -1.6806 |