| Chain sequence(s) |
A: GAMPSKLALIQELPDRIQTAVEAAMGMSYQDAPNNVRRDLDNLHACLNKAKLTVGRMVTSLLEKPSVVAYLEGK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:18)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| -1 | G | A | -0.2146 | |
| 0 | A | A | 0.2651 | |
| 1 | M | A | 0.8257 | |
| 2 | P | A | -0.2451 | |
| 3 | S | A | -0.7582 | |
| 4 | K | A | -1.4741 | |
| 5 | L | A | -0.8399 | |
| 6 | A | A | -0.8084 | |
| 7 | L | A | -0.8778 | |
| 8 | I | A | 0.0000 | |
| 9 | Q | A | -1.8673 | |
| 10 | E | A | -2.6887 | |
| 11 | L | A | -1.4903 | |
| 12 | P | A | -1.7703 | |
| 13 | D | A | -3.4403 | |
| 14 | R | A | -3.1708 | |
| 15 | I | A | -1.5598 | |
| 16 | Q | A | -2.1304 | |
| 17 | T | A | -1.8911 | |
| 18 | A | A | -1.1329 | |
| 19 | V | A | 0.0000 | |
| 20 | E | A | -2.3994 | |
| 21 | A | A | -0.9076 | |
| 22 | A | A | -0.4773 | |
| 23 | M | A | -0.9133 | |
| 24 | G | A | -0.7363 | |
| 25 | M | A | -0.4679 | |
| 26 | S | A | -0.9158 | |
| 27 | Y | A | -1.9108 | |
| 28 | Q | A | -2.6796 | |
| 29 | D | A | -2.5105 | |
| 30 | A | A | -2.1977 | |
| 31 | P | A | -2.2144 | |
| 32 | N | A | -3.3204 | |
| 33 | N | A | -2.9897 | |
| 34 | V | A | -2.2367 | |
| 35 | R | A | -3.5323 | |
| 36 | R | A | -4.5933 | |
| 37 | D | A | -3.7758 | |
| 38 | L | A | -2.5778 | |
| 39 | D | A | -3.7524 | |
| 40 | N | A | -3.0621 | |
| 41 | L | A | -1.7146 | |
| 42 | H | A | -1.8774 | |
| 43 | A | A | -1.7749 | |
| 44 | C | A | -0.9100 | |
| 45 | L | A | -0.9385 | |
| 46 | N | A | -1.7102 | |
| 47 | K | A | -1.5801 | |
| 48 | A | A | -0.5983 | |
| 49 | K | A | -0.9190 | |
| 50 | L | A | 0.2794 | |
| 51 | T | A | -0.2386 | |
| 52 | V | A | 0.1088 | |
| 53 | G | A | -0.5118 | |
| 54 | R | A | -1.2326 | |
| 55 | M | A | 0.1074 | |
| 56 | V | A | 0.0000 | |
| 57 | T | A | -0.9593 | |
| 58 | S | A | -0.9255 | |
| 59 | L | A | -0.4431 | |
| 60 | L | A | -0.8467 | |
| 61 | E | A | -2.4549 | |
| 62 | K | A | -2.2807 | |
| 63 | P | A | -1.1277 | |
| 64 | S | A | -0.4352 | |
| 65 | V | A | 0.1340 | |
| 66 | V | A | -0.5244 | |
| 67 | A | A | -0.7896 | |
| 68 | Y | A | 0.1398 | |
| 69 | L | A | 0.0000 | |
| 70 | E | A | -2.0619 | |
| 71 | G | A | -1.6889 | |
| 72 | K | A | -2.0403 |