Project name: FHVB2

Status: done

Started: 2026-07-07 06:54:37
Settings
Chain sequence(s) A: GAMPSKLALIQELPDRIQTAVEAAMGMSYQDAPNNVRRDLDNLHACLNKAKLTVGRMVTSLLEKPSVVAYLEGK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:19)
Show buried residues

Minimal score value
-4.5933
Maximal score value
0.8257
Average score
-1.3953
Total score value
-103.2551

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
-1 G A -0.2146
0 A A 0.2651
1 M A 0.8257
2 P A -0.2451
3 S A -0.7582
4 K A -1.4741
5 L A -0.8399
6 A A -0.8084
7 L A -0.8778
8 I A 0.0000
9 Q A -1.8673
10 E A -2.6887
11 L A -1.4903
12 P A -1.7703
13 D A -3.4403
14 R A -3.1708
15 I A -1.5598
16 Q A -2.1304
17 T A -1.8911
18 A A -1.1329
19 V A 0.0000
20 E A -2.3994
21 A A -0.9076
22 A A -0.4773
23 M A -0.9133
24 G A -0.7363
25 M A -0.4679
26 S A -0.9158
27 Y A -1.9108
28 Q A -2.6796
29 D A -2.5105
30 A A -2.1977
31 P A -2.2144
32 N A -3.3204
33 N A -2.9897
34 V A -2.2367
35 R A -3.5323
36 R A -4.5933
37 D A -3.7758
38 L A -2.5778
39 D A -3.7524
40 N A -3.0621
41 L A -1.7146
42 H A -1.8774
43 A A -1.7749
44 C A -0.9100
45 L A -0.9385
46 N A -1.7102
47 K A -1.5801
48 A A -0.5983
49 K A -0.9190
50 L A 0.2794
51 T A -0.2386
52 V A 0.1088
53 G A -0.5118
54 R A -1.2326
55 M A 0.1074
56 V A 0.0000
57 T A -0.9593
58 S A -0.9255
59 L A -0.4431
60 L A -0.8467
61 E A -2.4549
62 K A -2.2807
63 P A -1.1277
64 S A -0.4352
65 V A 0.1340
66 V A -0.5244
67 A A -0.7896
68 Y A 0.1398
69 L A 0.0000
70 E A -2.0619
71 G A -1.6889
72 K A -2.0403
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Laboratory of Theory of Biopolymers 2018