| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSVVTAPDAAFDSFWIRYDEVAVVGGEAIVLTVPGSERSYDLTGLKPGTEYYVNILGVKGGSISVPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.0378 | |
| 2 | P | A | 0.3551 | |
| 3 | A | A | 0.3847 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.9601 | |
| 6 | N | A | -1.2353 | |
| 7 | L | A | -0.2892 | |
| 8 | V | A | 0.9736 | |
| 9 | V | A | 0.3554 | |
| 10 | S | A | -0.7958 | |
| 11 | R | A | -1.8598 | |
| 12 | V | A | -1.0546 | |
| 13 | T | A | -1.7930 | |
| 14 | E | A | -2.8944 | |
| 15 | D | A | -2.8028 | |
| 16 | S | A | -2.1755 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.5285 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.7776 | |
| 21 | V | A | 0.0000 | |
| 22 | V | A | -0.7114 | |
| 23 | T | A | -1.2170 | |
| 24 | A | A | -1.1354 | |
| 25 | P | A | -1.0403 | |
| 26 | D | A | -1.8833 | |
| 27 | A | A | -1.3114 | |
| 28 | A | A | -1.1619 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.3152 | |
| 31 | S | A | -1.1245 | |
| 32 | F | A | 0.0000 | |
| 33 | W | A | 0.8581 | |
| 34 | I | A | 0.0000 | |
| 35 | R | A | -0.1263 | |
| 36 | Y | A | 0.0000 | |
| 37 | D | A | 0.0097 | |
| 38 | E | A | 0.3008 | |
| 39 | V | A | 1.7397 | |
| 40 | A | A | 1.4226 | |
| 41 | V | A | 2.0970 | |
| 42 | V | A | 2.2026 | |
| 43 | G | A | 0.3779 | |
| 44 | G | A | 0.0254 | |
| 45 | E | A | -1.3176 | |
| 46 | A | A | -0.6298 | |
| 47 | I | A | 0.5920 | |
| 48 | V | A | 1.2594 | |
| 49 | L | A | 1.0975 | |
| 50 | T | A | 0.5576 | |
| 51 | V | A | -0.3489 | |
| 52 | P | A | -1.1978 | |
| 53 | G | A | -1.7213 | |
| 54 | S | A | -1.7046 | |
| 55 | E | A | -2.3874 | |
| 56 | R | A | -2.3830 | |
| 57 | S | A | -1.6672 | |
| 58 | Y | A | 0.0000 | |
| 59 | D | A | -2.1961 | |
| 60 | L | A | 0.0000 | |
| 61 | T | A | -1.5895 | |
| 62 | G | A | -1.5157 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -3.0320 | |
| 65 | P | A | -2.5602 | |
| 66 | G | A | -1.8313 | |
| 67 | T | A | -1.5560 | |
| 68 | E | A | -0.6341 | |
| 69 | Y | A | 0.0000 | |
| 70 | Y | A | 0.8311 | |
| 71 | V | A | 0.0000 | |
| 72 | N | A | 0.1875 | |
| 73 | I | A | 0.0000 | |
| 74 | L | A | 0.8428 | |
| 75 | G | A | 0.0000 | |
| 76 | V | A | -0.2818 | |
| 77 | K | A | -1.4941 | |
| 78 | G | A | -1.3628 | |
| 79 | G | A | -1.0081 | |
| 80 | S | A | -0.3200 | |
| 81 | I | A | 1.1537 | |
| 82 | S | A | 0.0000 | |
| 83 | V | A | 2.0416 | |
| 84 | P | A | 0.8221 | |
| 85 | L | A | 0.0770 | |
| 86 | S | A | 0.4198 | |
| 87 | A | A | 1.1903 | |
| 88 | I | A | 2.0965 | |
| 89 | F | A | 0.0000 | |
| 90 | T | A | -0.5895 | |
| 91 | T | A | -1.9180 |