Project name: query_structure

Status: done

Started: 2026-03-16 20:29:35
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Chain sequence(s) A: LPAPKNLVVSRVTEDSARLSVVTAPDAAFDSFWIRYDEVAVVGGEAIVLTVPGSERSYDLTGLKPGTEYYVNILGVKGGSISVPLSAIFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:42)
Show buried residues

Minimal score value
-3.032
Maximal score value
2.2026
Average score
-0.452
Total score value
-41.1308

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 1.0378
2 P A 0.3551
3 A A 0.3847
4 P A 0.0000
5 K A -1.9601
6 N A -1.2353
7 L A -0.2892
8 V A 0.9736
9 V A 0.3554
10 S A -0.7958
11 R A -1.8598
12 V A -1.0546
13 T A -1.7930
14 E A -2.8944
15 D A -2.8028
16 S A -2.1755
17 A A 0.0000
18 R A -1.5285
19 L A 0.0000
20 S A -0.7776
21 V A 0.0000
22 V A -0.7114
23 T A -1.2170
24 A A -1.1354
25 P A -1.0403
26 D A -1.8833
27 A A -1.3114
28 A A -1.1619
29 F A 0.0000
30 D A -2.3152
31 S A -1.1245
32 F A 0.0000
33 W A 0.8581
34 I A 0.0000
35 R A -0.1263
36 Y A 0.0000
37 D A 0.0097
38 E A 0.3008
39 V A 1.7397
40 A A 1.4226
41 V A 2.0970
42 V A 2.2026
43 G A 0.3779
44 G A 0.0254
45 E A -1.3176
46 A A -0.6298
47 I A 0.5920
48 V A 1.2594
49 L A 1.0975
50 T A 0.5576
51 V A -0.3489
52 P A -1.1978
53 G A -1.7213
54 S A -1.7046
55 E A -2.3874
56 R A -2.3830
57 S A -1.6672
58 Y A 0.0000
59 D A -2.1961
60 L A 0.0000
61 T A -1.5895
62 G A -1.5157
63 L A 0.0000
64 K A -3.0320
65 P A -2.5602
66 G A -1.8313
67 T A -1.5560
68 E A -0.6341
69 Y A 0.0000
70 Y A 0.8311
71 V A 0.0000
72 N A 0.1875
73 I A 0.0000
74 L A 0.8428
75 G A 0.0000
76 V A -0.2818
77 K A -1.4941
78 G A -1.3628
79 G A -1.0081
80 S A -0.3200
81 I A 1.1537
82 S A 0.0000
83 V A 2.0416
84 P A 0.8221
85 L A 0.0770
86 S A 0.4198
87 A A 1.1903
88 I A 2.0965
89 F A 0.0000
90 T A -0.5895
91 T A -1.9180
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Laboratory of Theory of Biopolymers 2018