| Chain sequence(s) |
A: MEAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVYQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:06)
[INFO] Main: Simulation completed successfully. (00:03:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1280 | |
| 2 | E | A | -1.7391 | |
| 3 | A | A | -1.2624 | |
| 4 | G | A | -2.1189 | |
| 5 | R | A | -2.9802 | |
| 6 | P | A | -2.0695 | |
| 7 | R | A | -2.6595 | |
| 8 | P | A | -1.4902 | |
| 9 | V | A | -0.4060 | |
| 10 | L | A | 0.0000 | |
| 11 | R | A | -0.7784 | |
| 12 | S | A | 0.0000 | |
| 13 | V | A | 0.6923 | |
| 14 | N | A | -1.0145 | |
| 15 | S | A | -1.6841 | |
| 16 | R | A | -2.6915 | |
| 17 | E | A | -2.4692 | |
| 18 | P | A | -1.7491 | |
| 19 | S | A | 0.0000 | |
| 20 | Q | A | -1.3032 | |
| 21 | V | A | 0.0000 | |
| 22 | I | A | -0.6255 | |
| 23 | F | A | 0.0000 | |
| 24 | C | A | -1.1139 | |
| 25 | N | A | 0.0000 | |
| 26 | R | A | -2.2687 | |
| 27 | S | A | 0.0000 | |
| 28 | P | A | -0.9981 | |
| 29 | R | A | -1.0149 | |
| 30 | V | A | -0.2279 | |
| 31 | V | A | 0.0000 | |
| 32 | L | A | 0.0312 | |
| 33 | P | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | W | A | -0.2963 | |
| 36 | L | A | 0.0000 | |
| 37 | N | A | -1.0542 | |
| 38 | F | A | -0.7206 | |
| 39 | D | A | -2.2171 | |
| 40 | G | A | -1.7792 | |
| 41 | E | A | -2.6440 | |
| 42 | P | A | -1.5344 | |
| 43 | Q | A | -0.9730 | |
| 44 | P | A | -0.4372 | |
| 45 | Y | A | 0.1748 | |
| 46 | P | A | -0.1572 | |
| 47 | T | A | 0.0074 | |
| 48 | L | A | 0.0000 | |
| 49 | P | A | -0.6130 | |
| 50 | P | A | -1.1023 | |
| 51 | G | A | -1.2939 | |
| 52 | T | A | -0.9949 | |
| 53 | G | A | -1.5114 | |
| 54 | R | A | -1.8446 | |
| 55 | R | A | -2.3005 | |
| 56 | I | A | -1.4688 | |
| 57 | H | A | -1.5380 | |
| 58 | S | A | 0.0000 | |
| 59 | Y | A | -1.2603 | |
| 60 | R | A | -1.5882 | |
| 61 | G | A | -0.1963 | |
| 62 | H | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | W | A | 0.0000 | |
| 65 | L | A | 0.0000 | |
| 66 | F | A | 0.0000 | |
| 67 | R | A | 0.0000 | |
| 68 | D | A | 0.0000 | |
| 69 | A | A | -0.3763 | |
| 70 | G | A | -0.6169 | |
| 71 | T | A | -0.9221 | |
| 72 | H | A | -1.0609 | |
| 73 | D | A | -0.9452 | |
| 74 | G | A | -0.4103 | |
| 75 | L | A | 0.0000 | |
| 76 | L | A | 0.1644 | |
| 77 | V | A | 0.0000 | |
| 78 | Y | A | 0.6805 | |
| 79 | Q | A | -0.6247 | |
| 80 | T | A | -0.3372 | |
| 81 | E | A | -0.4261 | |
| 82 | L | A | 0.4266 | |
| 83 | F | A | 0.0000 | |
| 84 | V | A | 1.5485 | |
| 85 | P | A | 0.0000 | |
| 86 | S | A | 0.0891 | |
| 87 | L | A | -0.1018 | |
| 88 | N | A | -0.4577 | |
| 89 | V | A | 0.4773 | |
| 90 | D | A | -1.5099 | |
| 91 | G | A | -1.3895 | |
| 92 | Q | A | -1.3412 | |
| 93 | P | A | -0.5568 | |
| 94 | I | A | 0.5249 | |
| 95 | F | A | 0.8834 | |
| 96 | A | A | 0.0000 | |
| 97 | N | A | -0.5062 | |
| 98 | I | A | 0.0000 | |
| 99 | T | A | -0.4059 | |
| 100 | L | A | 0.3461 | |
| 101 | P | A | 0.9035 | |
| 102 | V | A | 1.8614 | |
| 103 | Y | A | 0.5120 | |
| 104 | T | A | 0.0944 | |
| 105 | L | A | 0.3994 | |
| 106 | K | A | -1.2720 | |
| 107 | E | A | -1.5386 | |
| 108 | R | A | -1.3815 | |
| 109 | C | A | -0.5026 | |
| 110 | L | A | 0.0000 | |
| 111 | Q | A | -0.4746 | |
| 112 | V | A | 0.4647 | |
| 113 | V | A | 0.5547 | |
| 114 | R | A | -0.3644 | |
| 115 | S | A | 0.4971 | |
| 116 | L | A | 1.3491 | |
| 117 | V | A | -0.4389 | |
| 118 | K | A | -2.1934 | |
| 119 | P | A | -2.8046 | |
| 120 | E | A | -3.6499 | |
| 121 | N | A | -3.3907 | |
| 122 | Y | A | 0.0000 | |
| 123 | R | A | -3.9607 | |
| 124 | R | A | -3.4524 | |
| 125 | L | A | -1.8541 | |
| 126 | D | A | -1.9001 | |
| 127 | I | A | -0.0757 | |
| 128 | V | A | 0.7912 | |
| 129 | R | A | -1.6299 | |
| 130 | S | A | -0.8426 | |
| 131 | L | A | -1.1404 | |
| 132 | Y | A | 0.0000 | |
| 133 | E | A | -3.6980 | |
| 134 | D | A | -3.0126 | |
| 135 | L | A | 0.0000 | |
| 136 | E | A | -4.0859 | |
| 137 | D | A | -3.7389 | |
| 138 | H | A | -2.8769 | |
| 139 | P | A | -2.1529 | |
| 140 | N | A | -2.5655 | |
| 141 | V | A | -2.1444 | |
| 142 | Q | A | -3.2368 | |
| 143 | K | A | -3.6965 | |
| 144 | D | A | -2.9083 | |
| 145 | L | A | 0.0000 | |
| 146 | E | A | -3.9209 | |
| 147 | R | A | -3.7396 | |
| 148 | L | A | -2.6053 | |
| 149 | T | A | -2.5087 | |
| 150 | Q | A | -3.1832 | |
| 151 | E | A | -3.5431 | |
| 152 | R | A | -3.3980 | |
| 153 | I | A | -1.8279 | |
| 154 | A | A | -2.2382 | |
| 155 | H | A | -3.0250 | |
| 156 | Q | A | -3.3065 | |
| 157 | R | A | -2.9571 | |
| 158 | M | A | -1.2305 | |
| 159 | G | A | -2.0299 | |
| 160 | D | A | -2.6570 |