| Chain sequence(s) |
A: GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSWDERTKEEVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVEASEWWQWEWFSCSVMHEALHNHYTQKSLRRSPGK
B: GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSWDERTKEEVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVEASEWWQWEWFSCSVMHEALHNHYTQKSLRRSPGK input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:44)
[INFO] Main: Simulation completed successfully. (00:05:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.8649 | |
| 2 | P | A | 0.0000 | |
| 3 | S | A | -0.1220 | |
| 4 | V | A | 0.0000 | |
| 5 | F | A | 1.1015 | |
| 6 | L | A | 0.8330 | |
| 7 | F | A | 1.0856 | |
| 8 | P | A | -0.2086 | |
| 9 | P | A | 0.0000 | |
| 10 | K | A | -2.1854 | |
| 11 | P | A | -1.3423 | |
| 12 | K | A | -1.1309 | |
| 13 | D | A | 0.0000 | |
| 14 | T | A | 0.0000 | |
| 15 | L | A | 0.0000 | |
| 16 | M | A | 0.2263 | |
| 17 | I | A | 1.3578 | |
| 18 | S | A | -0.0381 | |
| 19 | R | A | -1.5076 | |
| 20 | T | A | -0.8478 | |
| 21 | P | A | 0.0000 | |
| 22 | E | A | -1.0703 | |
| 23 | V | A | 0.0000 | |
| 24 | T | A | 0.2800 | |
| 25 | C | A | 0.0000 | |
| 26 | V | A | 0.0000 | |
| 27 | V | A | 0.0000 | |
| 28 | V | A | -0.8410 | |
| 29 | D | A | -1.6598 | |
| 30 | V | A | 0.0000 | |
| 31 | S | A | -2.1838 | |
| 32 | H | A | -2.6378 | |
| 33 | E | A | -2.9620 | |
| 34 | D | A | -2.5779 | |
| 35 | P | A | -2.7350 | |
| 36 | E | A | -3.1124 | |
| 37 | V | A | -1.9922 | |
| 38 | K | A | -2.2457 | |
| 39 | F | A | -1.1586 | |
| 40 | N | A | -1.1691 | |
| 41 | W | A | 0.0000 | |
| 42 | Y | A | -0.6380 | |
| 43 | V | A | -0.8429 | |
| 44 | D | A | -2.0426 | |
| 45 | G | A | -0.8665 | |
| 46 | V | A | 0.5711 | |
| 47 | E | A | -0.7450 | |
| 48 | V | A | -0.5819 | |
| 49 | H | A | -1.9052 | |
| 50 | N | A | -2.1667 | |
| 51 | A | A | -1.9040 | |
| 52 | K | A | -2.5121 | |
| 53 | T | A | -2.1448 | |
| 54 | K | A | -2.8647 | |
| 55 | P | A | -2.6757 | |
| 56 | R | A | -3.7162 | |
| 57 | E | A | -3.8140 | |
| 58 | E | A | -3.4128 | |
| 59 | Q | A | -1.6370 | |
| 60 | Y | A | 0.2166 | |
| 61 | N | A | -0.7038 | |
| 62 | S | A | -0.9805 | |
| 63 | T | A | -1.9788 | |
| 64 | Y | A | 0.0000 | |
| 65 | R | A | -2.5066 | |
| 66 | V | A | 0.0000 | |
| 67 | V | A | -1.0624 | |
| 68 | S | A | 0.0000 | |
| 69 | V | A | -0.8783 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.6538 | |
| 72 | V | A | 0.0000 | |
| 73 | L | A | 0.4955 | |
| 74 | H | A | -0.2758 | |
| 75 | Q | A | -1.2767 | |
| 76 | D | A | -1.3528 | |
| 77 | W | A | 0.0000 | |
| 78 | L | A | -1.0458 | |
| 79 | N | A | -2.1209 | |
| 80 | G | A | -2.1123 | |
| 81 | K | A | -2.1839 | |
| 82 | E | A | -1.9760 | |
| 83 | Y | A | 0.0000 | |
| 84 | K | A | -1.6254 | |
| 85 | C | A | 0.0000 | |
| 86 | K | A | -1.5753 | |
| 87 | V | A | 0.0000 | |
| 88 | S | A | -1.4674 | |
| 89 | N | A | 0.0000 | |
| 90 | K | A | -2.5735 | |
| 91 | A | A | -1.4450 | |
| 92 | L | A | -0.6067 | |
| 93 | P | A | -0.5043 | |
| 94 | A | A | -0.4159 | |
| 95 | P | A | -0.8598 | |
| 96 | I | A | -0.6329 | |
| 97 | E | A | -1.9926 | |
| 98 | K | A | -1.3115 | |
| 99 | T | A | -1.0012 | |
| 100 | I | A | -0.1925 | |
| 101 | S | A | -1.1093 | |
| 102 | K | A | -1.2677 | |
| 103 | A | A | -1.1719 | |
| 104 | K | A | -2.3478 | |
| 105 | G | A | -1.9640 | |
| 106 | Q | A | -2.1057 | |
| 107 | P | A | -1.7321 | |
| 108 | R | A | -1.9851 | |
| 109 | E | A | -2.6071 | |
| 110 | P | A | 0.0000 | |
| 111 | Q | A | -1.2703 | |
| 112 | V | A | 0.0000 | |
| 113 | Y | A | 0.0000 | |
| 114 | T | A | 0.0000 | |
| 115 | L | A | 0.0000 | |
| 116 | P | A | -0.3208 | |
| 117 | P | A | -0.4820 | |
| 118 | S | A | -0.2301 | |
| 119 | W | A | 0.0880 | |
| 120 | D | A | -1.4834 | |
| 121 | E | A | 0.0000 | |
| 122 | R | A | -1.8144 | |
| 123 | T | A | -1.6364 | |
| 124 | K | A | -2.8517 | |
| 125 | E | A | -3.6364 | |
| 126 | E | A | -3.8416 | |
| 127 | V | A | 0.0000 | |
| 128 | S | A | 0.0000 | |
| 129 | L | A | 0.0000 | |
| 130 | T | A | 0.0000 | |
| 131 | C | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | V | A | 0.0000 | |
| 134 | K | A | -0.4679 | |
| 135 | G | A | -0.9495 | |
| 136 | F | A | 0.0000 | |
| 137 | Y | A | -0.9980 | |
| 138 | P | A | 0.0000 | |
| 139 | S | A | -0.1618 | |
| 140 | D | A | -1.1484 | |
| 141 | I | A | 0.0000 | |
| 142 | A | A | 0.0000 | |
| 143 | V | A | 0.0000 | |
| 144 | E | A | -1.1609 | |
| 145 | W | A | 0.0000 | |
| 146 | E | A | -1.8867 | |
| 147 | S | A | -1.6195 | |
| 148 | N | A | -1.8211 | |
| 149 | G | A | -1.7408 | |
| 150 | Q | A | -2.3419 | |
| 151 | P | A | -2.0057 | |
| 152 | E | A | -2.0599 | |
| 153 | N | A | -2.1488 | |
| 154 | N | A | -1.4885 | |
| 155 | Y | A | -1.0053 | |
| 156 | K | A | -0.7281 | |
| 157 | T | A | -0.2254 | |
| 158 | T | A | 0.0000 | |
| 159 | P | A | -0.1221 | |
| 160 | P | A | 0.1843 | |
| 161 | V | A | 0.6639 | |
| 162 | L | A | 1.0638 | |
| 163 | D | A | -0.3759 | |
| 164 | S | A | -1.1212 | |
| 165 | D | A | -1.8404 | |
| 166 | G | A | -0.7929 | |
| 167 | S | A | 0.0000 | |
| 168 | F | A | 0.2822 | |
| 169 | F | A | 0.0000 | |
| 170 | L | A | 0.0000 | |
| 171 | Y | A | 0.0000 | |
| 172 | S | A | 0.0000 | |
| 173 | K | A | 0.0000 | |
| 174 | L | A | 0.0000 | |
| 175 | T | A | -1.2556 | |
| 176 | V | A | 0.0000 | |
| 177 | E | A | -3.4073 | |
| 178 | A | A | -2.9020 | |
| 179 | S | A | -2.0920 | |
| 180 | E | A | -2.0307 | |
| 181 | W | A | 0.0000 | |
| 182 | W | A | -1.1257 | |
| 183 | Q | A | -1.3896 | |
| 184 | W | A | -0.7030 | |
| 185 | E | A | -0.9023 | |
| 186 | W | A | -0.1712 | |
| 187 | F | A | 0.0000 | |
| 188 | S | A | 0.0000 | |
| 189 | C | A | 0.0000 | |
| 190 | S | A | 0.0000 | |
| 191 | V | A | 0.0000 | |
| 192 | M | A | 0.0000 | |
| 193 | H | A | 0.0000 | |
| 194 | E | A | -1.1436 | |
| 195 | A | A | -1.5672 | |
| 196 | L | A | 0.0000 | |
| 197 | H | A | -1.8450 | |
| 198 | N | A | -1.7276 | |
| 199 | H | A | -1.2579 | |
| 200 | Y | A | -0.5691 | |
| 201 | T | A | 0.0000 | |
| 202 | Q | A | -1.4431 | |
| 203 | K | A | -1.3326 | |
| 204 | S | A | -0.7872 | |
| 205 | L | A | 0.0000 | |
| 206 | R | A | -0.9223 | |
| 207 | R | A | -1.1161 | |
| 208 | S | A | -1.1398 | |
| 209 | P | A | -1.2652 | |
| 210 | G | A | -1.8604 | |
| 211 | K | A | -2.4929 | |
| 1 | G | B | -0.8513 | |
| 2 | P | B | 0.0000 | |
| 3 | S | B | -0.1718 | |
| 4 | V | B | 0.0000 | |
| 5 | F | B | 0.9373 | |
| 6 | L | B | 0.7129 | |
| 7 | F | B | 1.0641 | |
| 8 | P | B | -0.1723 | |
| 9 | P | B | 0.0000 | |
| 10 | K | B | -2.3009 | |
| 11 | P | B | -1.5000 | |
| 12 | K | B | -1.5190 | |
| 13 | D | B | -1.5177 | |
| 14 | T | B | 0.0000 | |
| 15 | L | B | 0.0000 | |
| 16 | M | B | 0.0479 | |
| 17 | I | B | 1.2633 | |
| 18 | S | B | -0.1077 | |
| 19 | R | B | -1.6876 | |
| 20 | T | B | -0.9264 | |
| 21 | P | B | 0.0000 | |
| 22 | E | B | -0.9908 | |
| 23 | V | B | 0.0000 | |
| 24 | T | B | 0.2237 | |
| 25 | C | B | 0.0000 | |
| 26 | V | B | 0.0000 | |
| 27 | V | B | 0.0000 | |
| 28 | V | B | -0.9518 | |
| 29 | D | B | -1.6207 | |
| 30 | V | B | 0.0000 | |
| 31 | S | B | -2.1277 | |
| 32 | H | B | -2.6271 | |
| 33 | E | B | -3.0118 | |
| 34 | D | B | -2.6665 | |
| 35 | P | B | -2.7605 | |
| 36 | E | B | -3.1144 | |
| 37 | V | B | -2.0413 | |
| 38 | K | B | -2.2371 | |
| 39 | F | B | -1.1813 | |
| 40 | N | B | -1.1394 | |
| 41 | W | B | 0.0000 | |
| 42 | Y | B | -0.6133 | |
| 43 | V | B | -0.8451 | |
| 44 | D | B | -2.0863 | |
| 45 | G | B | -0.8772 | |
| 46 | V | B | 0.5883 | |
| 47 | E | B | -0.6773 | |
| 48 | V | B | -0.5345 | |
| 49 | H | B | -1.8807 | |
| 50 | N | B | -2.1755 | |
| 51 | A | B | -1.8833 | |
| 52 | K | B | -2.4568 | |
| 53 | T | B | -1.9664 | |
| 54 | K | B | -2.4586 | |
| 55 | P | B | -2.4641 | |
| 56 | R | B | -3.5827 | |
| 57 | E | B | -3.7849 | |
| 58 | E | B | -3.3901 | |
| 59 | Q | B | -1.6131 | |
| 60 | Y | B | 0.2840 | |
| 61 | N | B | -0.5793 | |
| 62 | S | B | -0.8903 | |
| 63 | T | B | -1.9179 | |
| 64 | Y | B | -2.6779 | |
| 65 | R | B | -2.7034 | |
| 66 | V | B | 0.0000 | |
| 67 | V | B | -1.0918 | |
| 68 | S | B | 0.0000 | |
| 69 | V | B | 0.0000 | |
| 70 | L | B | 0.0000 | |
| 71 | T | B | -0.6013 | |
| 72 | V | B | 0.0000 | |
| 73 | L | B | 0.5786 | |
| 74 | H | B | -0.2670 | |
| 75 | Q | B | -1.2411 | |
| 76 | D | B | -1.3037 | |
| 77 | W | B | 0.0000 | |
| 78 | L | B | -1.0145 | |
| 79 | N | B | -2.0981 | |
| 80 | G | B | -2.0936 | |
| 81 | K | B | -2.1526 | |
| 82 | E | B | -2.0429 | |
| 83 | Y | B | 0.0000 | |
| 84 | K | B | -1.6900 | |
| 85 | C | B | 0.0000 | |
| 86 | K | B | -1.6309 | |
| 87 | V | B | 0.0000 | |
| 88 | S | B | -1.4844 | |
| 89 | N | B | 0.0000 | |
| 90 | K | B | -2.6035 | |
| 91 | A | B | -1.4689 | |
| 92 | L | B | -0.6164 | |
| 93 | P | B | -0.5050 | |
| 94 | A | B | -0.4446 | |
| 95 | P | B | -0.9125 | |
| 96 | I | B | -0.7340 | |
| 97 | E | B | -2.2284 | |
| 98 | K | B | -1.5016 | |
| 99 | T | B | -1.1342 | |
| 100 | I | B | -0.2231 | |
| 101 | S | B | -1.1209 | |
| 102 | K | B | -1.2750 | |
| 103 | A | B | -1.1789 | |
| 104 | K | B | -2.3495 | |
| 105 | G | B | -1.9598 | |
| 106 | Q | B | -2.0973 | |
| 107 | P | B | -1.7137 | |
| 108 | R | B | -1.9461 | |
| 109 | E | B | -2.5977 | |
| 110 | P | B | 0.0000 | |
| 111 | Q | B | -1.3040 | |
| 112 | V | B | 0.0000 | |
| 113 | Y | B | 0.0000 | |
| 114 | T | B | -0.5764 | |
| 115 | L | B | 0.0000 | |
| 116 | P | B | -0.5199 | |
| 117 | P | B | -0.5046 | |
| 118 | S | B | 0.0000 | |
| 119 | W | B | -0.0116 | |
| 120 | D | B | -1.6501 | |
| 121 | E | B | 0.0000 | |
| 122 | R | B | -1.9621 | |
| 123 | T | B | -1.7077 | |
| 124 | K | B | -2.8622 | |
| 125 | E | B | -3.6153 | |
| 126 | E | B | -3.7988 | |
| 127 | V | B | 0.0000 | |
| 128 | S | B | 0.0000 | |
| 129 | L | B | 0.0000 | |
| 130 | T | B | 0.0000 | |
| 131 | C | B | 0.0000 | |
| 132 | L | B | 0.0000 | |
| 133 | V | B | 0.0000 | |
| 134 | K | B | -0.4716 | |
| 135 | G | B | -0.9435 | |
| 136 | F | B | 0.0000 | |
| 137 | Y | B | -0.9578 | |
| 138 | P | B | 0.0000 | |
| 139 | S | B | -0.1275 | |
| 140 | D | B | -1.1435 | |
| 141 | I | B | -0.6331 | |
| 142 | A | B | -0.6179 | |
| 143 | V | B | 0.0000 | |
| 144 | E | B | -1.0131 | |
| 145 | W | B | 0.0000 | |
| 146 | E | B | -1.6739 | |
| 147 | S | B | -1.6059 | |
| 148 | N | B | -1.6822 | |
| 149 | G | B | -1.4907 | |
| 150 | Q | B | -2.1102 | |
| 151 | P | B | -1.8679 | |
| 152 | E | B | -1.9959 | |
| 153 | N | B | -2.2559 | |
| 154 | N | B | -1.7888 | |
| 155 | Y | B | -1.1870 | |
| 156 | K | B | -0.8386 | |
| 157 | T | B | -0.2557 | |
| 158 | T | B | 0.0000 | |
| 159 | P | B | -0.1404 | |
| 160 | P | B | 0.2073 | |
| 161 | V | B | 0.7025 | |
| 162 | L | B | 1.1108 | |
| 163 | D | B | -0.2925 | |
| 164 | S | B | -1.0416 | |
| 165 | D | B | -1.8204 | |
| 166 | G | B | -0.7562 | |
| 167 | S | B | 0.0000 | |
| 168 | F | B | 0.3302 | |
| 169 | F | B | 0.0000 | |
| 170 | L | B | 0.0000 | |
| 171 | Y | B | 0.0000 | |
| 172 | S | B | 0.0000 | |
| 173 | K | B | 0.0000 | |
| 174 | L | B | 0.0000 | |
| 175 | T | B | -1.3406 | |
| 176 | V | B | 0.0000 | |
| 177 | E | B | -3.3720 | |
| 178 | A | B | -2.8877 | |
| 179 | S | B | -2.0786 | |
| 180 | E | B | -2.1267 | |
| 181 | W | B | 0.0000 | |
| 182 | W | B | -1.2084 | |
| 183 | Q | B | -1.5589 | |
| 184 | W | B | -1.1249 | |
| 185 | E | B | -1.5559 | |
| 186 | W | B | -1.2252 | |
| 187 | F | B | 0.0000 | |
| 188 | S | B | 0.0000 | |
| 189 | C | B | 0.0000 | |
| 190 | S | B | 0.0000 | |
| 191 | V | B | 0.0000 | |
| 192 | M | B | 0.0000 | |
| 193 | H | B | 0.0000 | |
| 194 | E | B | -1.1328 | |
| 195 | A | B | -1.5522 | |
| 196 | L | B | 0.0000 | |
| 197 | H | B | -1.8481 | |
| 198 | N | B | -1.7299 | |
| 199 | H | B | -1.2768 | |
| 200 | Y | B | -0.4827 | |
| 201 | T | B | -0.6735 | |
| 202 | Q | B | -0.8705 | |
| 203 | K | B | -0.9222 | |
| 204 | S | B | -1.0092 | |
| 205 | L | B | 0.0000 | |
| 206 | R | B | -2.2676 | |
| 207 | R | B | -1.7223 | |
| 208 | S | B | -1.3787 | |
| 209 | P | B | -1.3668 | |
| 210 | G | B | -1.8547 | |
| 211 | K | B | -2.4893 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine