Project name: query_structure

Status: done

Started: 2026-03-17 01:12:43
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRVRDLLMSKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:51)
Show buried residues

Minimal score value
-3.3465
Maximal score value
1.6164
Average score
-0.7539
Total score value
-70.8658

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6164
2 S A 0.0606
3 D A -0.3248
4 V A -0.7706
5 P A 0.0000
6 R A -3.0740
7 D A -3.3465
8 L A 0.0000
9 E A -2.0899
10 V A 0.1167
11 V A 1.5459
12 A A 0.9018
13 A A 0.3192
14 T A -0.5249
15 P A -1.1225
16 T A -1.0018
17 S A -0.5328
18 L A 0.0000
19 L A 0.7541
20 I A 0.0000
21 S A -1.1190
22 W A 0.0000
23 D A -3.1835
24 A A -1.6480
25 P A 0.0000
26 A A 0.2833
27 V A 0.3866
28 T A -0.2838
29 V A -0.5638
30 R A -1.6941
31 Y A -0.9149
32 Y A 0.0000
33 R A -1.0586
34 I A 0.0000
35 T A -0.7372
36 Y A -0.4036
37 G A 0.0000
38 E A -1.8096
39 T A -1.4830
40 G A -1.3486
41 G A -1.5174
42 N A -1.5598
43 S A -0.9322
44 P A -0.4153
45 V A 0.2723
46 Q A -1.1994
47 E A -1.9156
48 F A -0.8747
49 T A -0.4710
50 V A 0.0000
51 P A -1.1376
52 G A -1.3536
53 S A -1.3267
54 K A -2.1567
55 S A -1.3850
56 T A -0.7620
57 A A 0.0000
58 T A 0.2391
59 I A 0.0000
60 S A -0.6587
61 G A -1.0272
62 L A 0.0000
63 K A -2.4616
64 P A -1.7537
65 G A -1.6006
66 V A -1.7396
67 D A -2.7772
68 Y A 0.0000
69 T A -0.9237
70 I A 0.0000
71 T A -0.5899
72 V A 0.0000
73 Y A -0.1314
74 A A 0.0000
75 V A 0.0000
76 T A 0.0321
77 G A -0.8346
78 R A -2.0385
79 V A -0.4497
80 R A -2.0855
81 D A -1.8612
82 L A 0.0424
83 L A 0.9009
84 M A 1.1251
85 S A 0.0000
86 K A -1.3981
87 P A -0.9007
88 I A -0.6090
89 S A -0.8397
90 I A -0.7439
91 N A -1.8708
92 Y A -1.6538
93 R A -2.8160
94 T A -1.6547
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Laboratory of Theory of Biopolymers 2018