| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFSISYRERSAWGEAIALVVPGSERSYDLTGLKPGIEYIVGIIGVKGGLRSNPLRADFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:48)
[INFO] Main: Simulation completed successfully. (00:00:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7939 | |
| 2 | L | A | 0.1560 | |
| 3 | P | A | -0.6748 | |
| 4 | A | A | -1.0550 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.1829 | |
| 7 | N | A | -1.4641 | |
| 8 | L | A | -0.5690 | |
| 9 | V | A | 0.7427 | |
| 10 | V | A | 0.0870 | |
| 11 | S | A | -0.6457 | |
| 12 | R | A | -2.0734 | |
| 13 | V | A | -1.1445 | |
| 14 | T | A | -1.8470 | |
| 15 | E | A | -3.0363 | |
| 16 | D | A | -2.7958 | |
| 17 | S | A | -2.1518 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2397 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3070 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2560 | |
| 24 | A | A | -1.4144 | |
| 25 | P | A | -1.4063 | |
| 26 | D | A | -2.2716 | |
| 27 | A | A | -1.4281 | |
| 28 | A | A | -1.1631 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.3682 | |
| 31 | S | A | -1.1037 | |
| 32 | F | A | 0.0000 | |
| 33 | S | A | 0.6955 | |
| 34 | I | A | 0.0000 | |
| 35 | S | A | 0.1926 | |
| 36 | Y | A | -0.7036 | |
| 37 | R | A | -1.4199 | |
| 38 | E | A | -2.1503 | |
| 39 | R | A | -2.5630 | |
| 40 | S | A | -1.1902 | |
| 41 | A | A | -0.8036 | |
| 42 | W | A | 0.1287 | |
| 43 | G | A | -0.9372 | |
| 44 | E | A | -1.6306 | |
| 45 | A | A | -0.7206 | |
| 46 | I | A | 0.2890 | |
| 47 | A | A | 0.7264 | |
| 48 | L | A | 1.4566 | |
| 49 | V | A | 1.9313 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.7329 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6379 | |
| 54 | E | A | -1.7626 | |
| 55 | R | A | -1.1911 | |
| 56 | S | A | -0.6575 | |
| 57 | Y | A | -0.7341 | |
| 58 | D | A | -1.6731 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3804 | |
| 61 | G | A | -1.5326 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9000 | |
| 64 | P | A | -2.3478 | |
| 65 | G | A | -1.5497 | |
| 66 | I | A | -1.6780 | |
| 67 | E | A | -2.3722 | |
| 68 | Y | A | 0.0000 | |
| 69 | I | A | -1.9379 | |
| 70 | V | A | 0.0000 | |
| 71 | G | A | -0.9655 | |
| 72 | I | A | 0.0000 | |
| 73 | I | A | -0.3684 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -0.8840 | |
| 76 | K | A | -1.4986 | |
| 77 | G | A | -1.1377 | |
| 78 | G | A | -0.7454 | |
| 79 | L | A | 0.2260 | |
| 80 | R | A | -1.2330 | |
| 81 | S | A | 0.0000 | |
| 82 | N | A | -1.5873 | |
| 83 | P | A | -1.4752 | |
| 84 | L | A | -1.3886 | |
| 85 | R | A | -2.2575 | |
| 86 | A | A | -1.3709 | |
| 87 | D | A | -2.4320 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.5192 | |
| 90 | T | A | -1.7441 |