| Chain sequence(s) |
B: MKRLMDMKKEFKEKKSELEKLDPVEQMKELTKLAKKIKEEVEKIKKELEA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:51)
[INFO] Main: Simulation completed successfully. (00:03:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 0.2751 | |
| 2 | K | B | -1.4986 | |
| 3 | R | B | -1.3485 | |
| 4 | L | B | -0.5433 | |
| 5 | M | B | -0.7216 | |
| 6 | D | B | -2.2956 | |
| 7 | M | B | 0.0000 | |
| 8 | K | B | -2.5115 | |
| 9 | K | B | -3.6272 | |
| 10 | E | B | -3.1993 | |
| 11 | F | B | -2.4009 | |
| 12 | K | B | -4.0642 | |
| 13 | E | B | -4.2188 | |
| 14 | K | B | -3.6052 | |
| 15 | K | B | -3.5784 | |
| 16 | S | B | -3.3977 | |
| 17 | E | B | -3.9730 | |
| 18 | L | B | 0.0000 | |
| 19 | E | B | -3.8335 | |
| 20 | K | B | -3.5464 | |
| 21 | L | B | -2.1788 | |
| 22 | D | B | -2.0754 | |
| 23 | P | B | -1.0425 | |
| 24 | V | B | 0.5137 | |
| 25 | E | B | -1.5463 | |
| 26 | Q | B | -1.9369 | |
| 27 | M | B | -0.2479 | |
| 28 | K | B | -2.1139 | |
| 29 | E | B | -2.3177 | |
| 30 | L | B | -1.2165 | |
| 31 | T | B | -1.9943 | |
| 32 | K | B | -3.1941 | |
| 33 | L | B | 0.0000 | |
| 34 | A | B | -2.4353 | |
| 35 | K | B | -3.8549 | |
| 36 | K | B | -3.5935 | |
| 37 | I | B | -2.8285 | |
| 38 | K | B | -4.1653 | |
| 39 | E | B | -4.5412 | |
| 40 | E | B | -3.5201 | |
| 41 | V | B | -3.2211 | |
| 42 | E | B | -4.3717 | |
| 43 | K | B | -4.1186 | |
| 44 | I | B | -2.7836 | |
| 45 | K | B | -3.8444 | |
| 46 | K | B | -3.9358 | |
| 47 | E | B | -2.7592 | |
| 48 | L | B | -1.2726 | |
| 49 | E | B | -2.5367 | |
| 50 | A | B | -1.3957 |