| Chain sequence(s) |
A: LPAPKNLWSRVTEDSARLSWTAPDAAFDSFWIRYFEFVSKGEAIVLTVPGSERSYDLTGLKPGTEYWNIMGVKGGSISPPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.9330 | |
| 2 | P | A | 0.0642 | |
| 3 | A | A | -0.2681 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.9911 | |
| 6 | N | A | -1.5855 | |
| 7 | L | A | -0.4124 | |
| 8 | W | A | -0.0067 | |
| 9 | S | A | -0.6760 | |
| 10 | R | A | -1.9799 | |
| 11 | V | A | -1.2491 | |
| 12 | T | A | -1.6460 | |
| 13 | E | A | -2.7196 | |
| 14 | D | A | -2.7448 | |
| 15 | S | A | -2.2379 | |
| 16 | A | A | 0.0000 | |
| 17 | R | A | -2.2286 | |
| 18 | L | A | 0.0000 | |
| 19 | S | A | -1.0051 | |
| 20 | W | A | 0.0000 | |
| 21 | T | A | -1.3091 | |
| 22 | A | A | -1.3805 | |
| 23 | P | A | -1.3334 | |
| 24 | D | A | -2.2687 | |
| 25 | A | A | -1.4389 | |
| 26 | A | A | -1.0768 | |
| 27 | F | A | 0.0000 | |
| 28 | D | A | -2.5110 | |
| 29 | S | A | -1.1368 | |
| 30 | F | A | 0.0000 | |
| 31 | W | A | 0.7077 | |
| 32 | I | A | 0.0000 | |
| 33 | R | A | 0.0253 | |
| 34 | Y | A | 1.0228 | |
| 35 | F | A | 1.2853 | |
| 36 | E | A | 0.5902 | |
| 37 | F | A | 1.6741 | |
| 38 | V | A | 1.0410 | |
| 39 | S | A | -0.4970 | |
| 40 | K | A | -1.6290 | |
| 41 | G | A | -1.5127 | |
| 42 | E | A | -1.8640 | |
| 43 | A | A | -0.4241 | |
| 44 | I | A | 0.6579 | |
| 45 | V | A | 1.0865 | |
| 46 | L | A | 0.8638 | |
| 47 | T | A | 0.2960 | |
| 48 | V | A | 0.0000 | |
| 49 | P | A | -1.0672 | |
| 50 | G | A | 0.0000 | |
| 51 | S | A | -1.6020 | |
| 52 | E | A | -1.5125 | |
| 53 | R | A | -1.1210 | |
| 54 | S | A | -0.8948 | |
| 55 | Y | A | -1.0092 | |
| 56 | D | A | -1.9926 | |
| 57 | L | A | 0.0000 | |
| 58 | T | A | -1.5289 | |
| 59 | G | A | -1.4957 | |
| 60 | L | A | 0.0000 | |
| 61 | K | A | -2.0185 | |
| 62 | P | A | -1.5571 | |
| 63 | G | A | -0.4780 | |
| 64 | T | A | 0.9424 | |
| 65 | E | A | 0.0000 | |
| 66 | Y | A | 2.0243 | |
| 67 | W | A | 0.0000 | |
| 68 | N | A | 0.2695 | |
| 69 | I | A | 0.0000 | |
| 70 | M | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | V | A | -0.3344 | |
| 73 | K | A | -1.3751 | |
| 74 | G | A | -1.3054 | |
| 75 | G | A | -0.9018 | |
| 76 | S | A | -0.1322 | |
| 77 | I | A | 1.1195 | |
| 78 | S | A | 0.0000 | |
| 79 | P | A | 0.0893 | |
| 80 | P | A | -0.4039 | |
| 81 | L | A | -0.6289 | |
| 82 | S | A | 0.2622 | |
| 83 | A | A | 1.3564 | |
| 84 | I | A | 2.3778 | |
| 85 | F | A | 0.0000 | |
| 86 | T | A | -0.0349 | |
| 87 | T | A | -1.5497 |