| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIIKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGSIGHPLFNKLGDTENPTAPQHPGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPEGHPRPAAPPPSPLYTPPPPSSPEAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPPINVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9492 | |
| 2 | L | A | 1.9681 | |
| 3 | P | A | 0.6547 | |
| 4 | P | A | 0.3312 | |
| 5 | T | A | 0.0763 | |
| 6 | T | A | -0.0540 | |
| 7 | P | A | 0.2500 | |
| 8 | V | A | 1.1576 | |
| 9 | A | A | -0.0184 | |
| 10 | K | A | -1.1078 | |
| 11 | V | A | -0.4319 | |
| 12 | Q | A | -1.5534 | |
| 13 | S | A | -1.6079 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4047 | |
| 16 | E | A | -2.4314 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4594 | |
| 20 | P | A | 0.1334 | |
| 21 | T | A | 0.1640 | |
| 22 | S | A | -0.0942 | |
| 23 | L | A | 0.1062 | |
| 24 | F | A | -0.0113 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1163 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.5535 | |
| 31 | R | A | -2.5028 | |
| 32 | L | A | -0.6833 | |
| 33 | L | A | 1.2033 | |
| 34 | T | A | 1.3462 | |
| 35 | V | A | 1.8000 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7035 | |
| 40 | R | A | -1.6655 | |
| 41 | D | A | -0.6953 | |
| 42 | I | A | 1.0241 | |
| 43 | I | A | 1.2836 | |
| 44 | K | A | -1.0477 | |
| 45 | N | A | -1.8730 | |
| 46 | G | A | -1.1717 | |
| 47 | K | A | -0.8576 | |
| 48 | V | A | 1.6100 | |
| 49 | V | A | 2.1507 | |
| 50 | V | A | 1.3683 | |
| 51 | P | A | 0.5544 | |
| 52 | K | A | -0.5991 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1244 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4930 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3015 | |
| 70 | K | A | -1.8159 | |
| 71 | F | A | -0.6748 | |
| 72 | A | A | -0.5990 | |
| 73 | L | A | -0.8750 | |
| 74 | P | A | -1.2643 | |
| 75 | Q | A | -2.4844 | |
| 76 | K | A | -3.1023 | |
| 77 | D | A | -2.9948 | |
| 78 | F | A | -1.6577 | |
| 79 | Y | A | -1.9265 | |
| 80 | D | A | -2.7653 | |
| 81 | P | A | -2.3576 | |
| 82 | E | A | -3.0746 | |
| 83 | K | A | -3.4530 | |
| 84 | E | A | -2.5131 | |
| 85 | R | A | -1.3162 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6448 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9301 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.2979 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6643 | |
| 99 | G | A | -0.5190 | |
| 100 | P | A | -0.4521 | |
| 101 | L | A | -0.0501 | |
| 102 | G | A | -0.6009 | |
| 103 | R | A | -1.4874 | |
| 104 | G | A | -0.9301 | |
| 105 | S | A | -0.7434 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.0565 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3499 | |
| 110 | L | A | 0.2195 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1327 | |
| 113 | K | A | -0.4317 | |
| 114 | L | A | -1.0083 | |
| 115 | G | A | -0.8877 | |
| 116 | D | A | -1.3585 | |
| 117 | T | A | -1.2153 | |
| 118 | E | A | -2.5900 | |
| 119 | N | A | -2.3470 | |
| 120 | P | A | -1.6376 | |
| 121 | T | A | -0.8938 | |
| 122 | A | A | -0.6102 | |
| 123 | P | A | -0.9635 | |
| 124 | Q | A | -1.1646 | |
| 125 | H | A | -1.3515 | |
| 126 | P | A | -1.4761 | |
| 127 | G | A | -1.5868 | |
| 128 | A | A | -1.2912 | |
| 129 | D | A | -2.2452 | |
| 130 | D | A | -1.7809 | |
| 131 | R | A | -1.1287 | |
| 132 | V | A | 0.2213 | |
| 133 | A | A | 0.4199 | |
| 134 | F | A | 0.2716 | |
| 135 | S | A | -0.1182 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8619 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5588 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2332 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1325 | |
| 157 | D | A | 0.2937 | |
| 158 | L | A | 0.7574 | |
| 159 | A | A | 0.1524 | |
| 160 | E | A | -1.4520 | |
| 161 | P | A | -0.2093 | |
| 162 | C | A | 0.1896 | |
| 163 | P | A | -0.1704 | |
| 164 | G | A | -0.0792 | |
| 165 | L | A | 0.5915 | |
| 166 | P | A | -0.1191 | |
| 167 | P | A | -0.3431 | |
| 168 | G | A | -0.4279 | |
| 169 | A | A | -0.0418 | |
| 170 | C | A | 0.6548 | |
| 171 | P | A | 0.5220 | |
| 172 | P | A | 0.6788 | |
| 173 | I | A | 1.9719 | |
| 174 | Q | A | 0.8350 | |
| 175 | L | A | 1.4841 | |
| 176 | V | A | 0.8349 | |
| 177 | N | A | -0.3251 | |
| 178 | S | A | 0.0266 | |
| 179 | V | A | 0.4304 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3803 | |
| 182 | D | A | 0.0881 | |
| 183 | G | A | -0.1559 | |
| 184 | D | A | -0.5587 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1361 | |
| 190 | F | A | 0.0471 | |
| 191 | G | A | -0.1121 | |
| 192 | N | A | -0.2805 | |
| 193 | M | A | -0.1510 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4313 | |
| 197 | E | A | -2.6410 | |
| 198 | L | A | -1.2422 | |
| 199 | Q | A | -2.5556 | |
| 200 | Q | A | -3.3511 | |
| 201 | D | A | -3.6085 | |
| 202 | R | A | -3.3891 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | -0.0397 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4531 | |
| 211 | S | A | -1.9592 | |
| 212 | T | A | -1.4966 | |
| 213 | R | A | -2.1563 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1769 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3412 | |
| 220 | L | A | 0.5421 | |
| 221 | K | A | -1.2281 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8620 | |
| 224 | N | A | -1.5464 | |
| 225 | E | A | -1.2999 | |
| 226 | A | A | -0.6815 | |
| 227 | Y | A | -0.4157 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6897 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.1023 | |
| 234 | F | A | 0.2907 | |
| 235 | G | A | -0.7706 | |
| 236 | R | A | -2.5297 | |
| 237 | R | A | -2.7251 | |
| 238 | E | A | -2.0193 | |
| 239 | Q | A | -0.0497 | |
| 240 | V | A | 1.5614 | |
| 241 | Y | A | 1.2578 | |
| 242 | A | A | 0.1811 | |
| 243 | R | A | -1.3077 | |
| 244 | H | A | -1.1346 | |
| 245 | F | A | -0.1181 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7568 | |
| 249 | S | A | -1.2509 | |
| 250 | G | A | -1.0978 | |
| 251 | P | A | -1.0593 | |
| 252 | E | A | -1.5494 | |
| 253 | G | A | -1.4059 | |
| 254 | H | A | -1.6659 | |
| 255 | P | A | -1.2729 | |
| 256 | R | A | -0.7938 | |
| 257 | P | A | -0.4782 | |
| 258 | A | A | -0.3339 | |
| 259 | A | A | -0.1582 | |
| 260 | P | A | -0.4958 | |
| 261 | P | A | -0.5358 | |
| 262 | P | A | -0.2787 | |
| 263 | S | A | 0.1315 | |
| 264 | P | A | 0.4831 | |
| 265 | L | A | 1.5368 | |
| 266 | Y | A | 1.0770 | |
| 267 | T | A | 0.2136 | |
| 268 | P | A | -0.0616 | |
| 269 | P | A | -0.4236 | |
| 270 | P | A | -0.7596 | |
| 271 | P | A | -0.5266 | |
| 272 | S | A | -0.6932 | |
| 273 | S | A | -0.6103 | |
| 274 | P | A | -0.7650 | |
| 275 | E | A | -1.0711 | |
| 276 | A | A | -0.0635 | |
| 277 | V | A | 1.0400 | |
| 278 | P | A | 0.0808 | |
| 279 | P | A | -0.5362 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.4567 | |
| 282 | D | A | -0.9577 | |
| 283 | Y | A | 0.8409 | |
| 284 | F | A | 0.7188 | |
| 285 | G | A | 0.1590 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8908 | |
| 291 | L | A | 1.5425 | |
| 292 | V | A | 0.5236 | |
| 293 | S | A | -0.1435 | |
| 294 | S | A | -0.9520 | |
| 295 | D | A | -1.8423 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0811 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.5966 | |
| 301 | R | A | -1.7830 | |
| 302 | P | A | -0.9178 | |
| 303 | F | A | -0.1332 | |
| 304 | W | A | -0.5109 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0843 | |
| 307 | R | A | -2.8292 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2478 | |
| 310 | G | A | -1.2076 | |
| 311 | N | A | -1.3022 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9455 | |
| 319 | N | A | -0.8983 | |
| 320 | E | A | -1.0566 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.5234 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.3992 | |
| 333 | N | A | 0.3938 | |
| 334 | F | A | 1.7339 | |
| 335 | T | A | 0.8828 | |
| 336 | I | A | 0.4723 | |
| 337 | S | A | -0.8496 | |
| 338 | Q | A | -1.5195 | |
| 339 | Q | A | -0.9222 | |
| 340 | L | A | 0.8035 | |
| 341 | C | A | 0.4602 | |
| 342 | T | A | 0.1849 | |
| 343 | P | A | -0.2531 | |
| 344 | P | A | 0.0655 | |
| 345 | I | A | 0.5738 | |
| 346 | N | A | -0.0457 | |
| 347 | V | A | 1.7130 | |
| 348 | Y | A | 1.5568 | |
| 349 | D | A | 0.0707 | |
| 350 | P | A | -0.3556 | |
| 351 | S | A | -0.2920 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.6216 | |
| 354 | K | A | -1.7131 | |
| 355 | N | A | -1.7187 | |
| 356 | Y | A | -0.0595 | |
| 357 | L | A | 0.6756 | |
| 358 | R | A | 0.9836 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3557 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0240 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8508 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6373 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3091 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3359 | |
| 376 | L | A | -1.7751 | |
| 377 | D | A | -2.0604 | |
| 378 | P | A | -1.0731 | |
| 379 | G | A | -1.0296 | |
| 380 | V | A | -0.9398 | |
| 381 | L | A | -0.5474 | |
| 382 | A | A | -0.6621 | |
| 383 | H | A | -0.8552 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4023 | |
| 386 | T | A | -0.5727 | |
| 387 | M | A | -0.3363 | |
| 388 | N | A | -0.8685 | |
| 389 | P | A | -1.2843 | |
| 390 | T | A | -1.5846 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5589 | |
| 393 | E | A | -2.9811 | |
| 394 | N | A | -2.7586 | |
| 395 | W | A | -1.5496 | |
| 396 | N | A | -1.3798 | |
| 397 | L | A | -0.2182 | |
| 398 | G | A | 0.5250 | |
| 399 | F | A | 2.4265 | |
| 400 | V | A | 1.8560 | |
| 401 | P | A | 0.0661 | |
| 402 | P | A | -1.9631 | |
| 403 | K | A | -3.5974 | |
| 404 | E | A | -4.0063 | |
| 405 | R | A | -4.4411 | |
| 406 | E | A | -4.0125 | |
| 407 | D | A | -2.9848 | |
| 408 | P | A | -1.8298 | |
| 409 | Y | A | -0.9910 | |
| 410 | K | A | -2.1050 | |
| 411 | G | A | -0.6394 | |
| 412 | L | A | 0.6666 | |
| 413 | I | A | 1.5917 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3687 | |
| 416 | E | A | -1.6193 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8510 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9253 | |
| 421 | E | A | -2.5532 | |
| 422 | R | A | -2.1481 | |
| 423 | F | A | -1.0639 | |
| 424 | S | A | -1.3295 | |
| 425 | Q | A | -1.7985 | |
| 426 | D | A | -2.8792 | |
| 427 | L | A | -1.9950 | |
| 428 | D | A | -2.7942 | |
| 429 | Q | A | -2.6174 | |
| 430 | F | A | -1.4548 | |
| 431 | A | A | -0.9247 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6567 | |
| 435 | K | A | -0.7668 | |
| 436 | F | A | 0.1291 | |
| 437 | L | A | 1.0100 | |
| 438 | Y | A | 0.8073 | |
| 439 | Q | A | -0.2800 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine