Project name: RVAC_29_03_2026 [mutate: YN5A] [mutate: TS16A]

Status: done

Started: 2026-03-31 11:46:09
Settings
Chain sequence(s) A: MDTPNANSTQEEPFLTSTLCLYYPTEAATEINDTEWKDTLSQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNIVLMKYDSNLELDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIGCLTTDTNTFEEVATAEKLVITDVVDGVNHKLDVTTNTCTIRNCKKLGPRENVAVIQVGGSNILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIVQVMSKRSRSLNSAAFYYRV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues TS16A
Energy difference between WT (input) and mutated protein (by FoldX) -0.164598 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:01:22)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:25)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:33)
Show buried residues

Minimal score value
-3.195
Maximal score value
2.6181
Average score
-0.6133
Total score value
-161.9141

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1615
2 D A -1.5565
3 T A -1.1048
4 P A -1.4401
5 N A -2.0200
6 A A -1.3353
7 N A -1.9738
8 S A -1.7645
9 T A -2.0754
10 Q A -3.0577
11 E A -3.1950
12 E A -2.8688
13 P A -1.7793
14 F A 0.0000
15 L A 0.6276
16 S A 0.2188 mutated: TS16A
17 S A 0.0000
18 T A 0.1693
19 L A 0.0000
20 C A 0.0000
21 L A 0.0000
22 Y A 0.0000
23 Y A 0.0000
24 P A 0.0000
25 T A -0.9528
26 E A -1.1033
27 A A 0.0000
28 A A -1.0345
29 T A -1.1045
30 E A -1.3333
31 I A 0.0000
32 N A -2.0870
33 D A -2.0875
34 T A -1.9782
35 E A -3.0514
36 W A 0.0000
37 K A -2.1481
38 D A -2.9892
39 T A -1.9008
40 L A 0.0000
41 S A -1.3721
42 Q A -1.4659
43 L A -0.5981
44 F A 0.0000
45 L A -0.1559
46 T A -0.4627
47 K A -0.8523
48 G A -0.3862
49 W A 0.0000
50 P A -0.0306
51 T A -0.5506
52 G A -0.3061
53 S A 0.0000
54 V A 0.2413
55 Y A 0.2856
56 F A -0.1807
57 K A -1.1651
58 E A -1.4707
59 Y A 0.0000
60 T A -0.7687
61 D A -0.9389
62 I A 0.0000
63 A A 0.0000
64 S A -0.6103
65 F A 0.0000
66 S A 0.0000
67 V A -0.2885
68 D A -1.8133
69 P A -1.1785
70 Q A -1.3614
71 L A 0.0000
72 Y A 0.8453
73 C A 0.0000
74 D A -0.7229
75 Y A 0.0000
76 N A 0.0000
77 I A 0.0000
78 V A 0.0000
79 L A 0.0000
80 M A 0.0000
81 K A -0.7774
82 Y A -1.0411
83 D A -1.5268
84 S A -1.7678
85 N A -1.8655
86 L A -1.7463
87 E A -2.8037
88 L A 0.0000
89 D A -2.4847
90 M A 0.0000
91 S A -1.2031
92 E A -1.2068
93 L A 0.0000
94 A A 0.0000
95 D A -1.4163
96 L A 0.0000
97 I A 0.0000
98 L A 0.0000
99 N A -0.7854
100 E A -0.7289
101 W A -0.3223
102 L A 0.6140
103 C A -0.1965
104 N A -1.4582
105 P A -1.3724
106 M A 0.0000
107 D A -0.5166
108 I A 0.3722
109 T A 0.7687
110 L A 2.0338
111 Y A 2.0364
112 Y A 1.3007
113 Y A 0.2639
114 Q A -0.9165
115 Q A 0.0000
116 T A -1.6897
117 D A -2.6486
118 E A -2.9419
119 A A -1.9806
120 N A 0.0000
121 K A -1.9854
122 W A 0.0000
123 I A 0.0000
124 S A 0.0000
125 M A 0.0000
126 G A -0.8269
127 S A -0.8428
128 S A -0.8933
129 C A 0.0000
130 T A -0.6229
131 I A 0.0000
132 K A -1.7396
133 V A 0.0000
134 C A 0.0000
135 P A 0.5380
136 L A 0.0000
137 N A -0.3027
138 T A -0.7691
139 Q A -1.0875
140 T A -0.0903
141 L A 1.0666
142 G A 1.1782
143 I A 1.9143
144 G A 0.6264
145 C A 0.6576
146 L A 1.4983
147 T A 0.6825
148 T A 0.0096
149 D A -0.6062
150 T A -1.2968
151 N A -1.8706
152 T A -1.1675
153 F A 0.0000
154 E A -2.7690
155 E A -2.3679
156 V A -0.6743
157 A A 0.0000
158 T A -0.5490
159 A A -0.5852
160 E A -1.5418
161 K A -1.4917
162 L A 0.0000
163 V A 0.0000
164 I A -0.4343
165 T A 0.0000
166 D A -1.8041
167 V A -0.6779
168 V A 0.0419
169 D A -2.1270
170 G A -1.1695
171 V A -0.4013
172 N A -0.4449
173 H A 0.0000
174 K A 0.3394
175 L A 0.0000
176 D A -1.2402
177 V A 0.0000
178 T A -0.6428
179 T A -0.8055
180 N A -1.3945
181 T A -0.9118
182 C A 0.0000
183 T A -0.6910
184 I A 0.0000
185 R A -1.2202
186 N A -1.2450
187 C A 0.0000
188 K A -1.5853
189 K A -1.1961
190 L A 0.0238
191 G A -0.5985
192 P A -1.2899
193 R A -1.3835
194 E A -2.0515
195 N A -1.3321
196 V A 0.0000
197 A A 0.0000
198 V A 0.0000
199 I A 0.0000
200 Q A 0.0000
201 V A 0.0000
202 G A -1.2254
203 G A -0.8813
204 S A -0.4163
205 N A -0.6823
206 I A 0.9823
207 L A 0.3140
208 D A -0.9665
209 I A -0.7600
210 T A -0.6953
211 A A -1.2377
212 D A -1.9580
213 P A -1.5023
214 T A -0.9080
215 T A -0.8528
216 A A -0.8621
217 P A -1.3088
218 Q A -2.0006
219 T A -1.5422
220 E A -2.4342
221 R A -1.4862
222 M A 0.0000
223 M A -0.6881
224 R A -0.9693
225 I A 0.0000
226 N A -1.8258
227 W A -1.4681
228 K A -2.2297
229 K A -1.7936
230 W A 0.0000
231 W A -0.4452
232 Q A -0.8292
233 V A 0.0000
234 F A 0.0000
235 Y A 0.2670
236 T A -0.2120
237 V A 0.0000
238 V A 0.0000
239 D A -1.4023
240 Y A -0.3695
241 V A 0.0000
242 N A -1.2059
243 Q A -1.0293
244 I A -0.3891
245 V A 0.0000
246 Q A -1.0242
247 V A 0.0156
248 M A 0.0000
249 S A -1.3040
250 K A -1.8477
251 R A -1.8629
252 S A -1.6790
253 R A -2.0811
254 S A -1.0655
255 L A 0.0731
256 N A -0.6059
257 S A -0.1295
258 A A 0.4542
259 A A 1.3971
260 F A 2.5826
261 Y A 2.6181
262 Y A 2.0962
263 R A 0.2966
264 V A 1.3961
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Laboratory of Theory of Biopolymers 2018