| Chain sequence(s) |
A: GKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLDVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:49)
[INFO] Main: Simulation completed successfully. (00:01:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.5882 | |
| 2 | K | A | -2.2254 | |
| 3 | I | A | 0.0000 | |
| 4 | T | A | -1.7751 | |
| 5 | L | A | 0.0000 | |
| 6 | Y | A | -2.2412 | |
| 7 | E | A | -2.3158 | |
| 8 | D | A | -3.0488 | |
| 9 | R | A | -2.8667 | |
| 10 | G | A | -1.7894 | |
| 11 | F | A | -2.0452 | |
| 12 | Q | A | -2.7189 | |
| 13 | G | A | -2.6943 | |
| 14 | R | A | -2.8014 | |
| 15 | H | A | -2.2993 | |
| 16 | Y | A | -1.1847 | |
| 17 | E | A | -1.8377 | |
| 18 | C | A | 0.0000 | |
| 19 | S | A | -1.2585 | |
| 20 | S | A | -1.1609 | |
| 21 | D | A | -1.3552 | |
| 22 | H | A | -1.4201 | |
| 23 | P | A | -1.7069 | |
| 24 | N | A | -1.8145 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.0047 | |
| 27 | P | A | -0.3295 | |
| 28 | Y | A | -0.3606 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -0.8034 | |
| 31 | R | A | -1.4289 | |
| 32 | C | A | 0.0000 | |
| 33 | N | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | R | A | -2.8125 | |
| 37 | V | A | 0.0000 | |
| 38 | D | A | -3.1916 | |
| 39 | S | A | -1.7855 | |
| 40 | G | A | -0.9989 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.4241 | |
| 47 | Q | A | -1.7012 | |
| 48 | P | A | -1.7293 | |
| 49 | N | A | -1.8419 | |
| 50 | Y | A | -1.1410 | |
| 51 | S | A | -1.0160 | |
| 52 | G | A | -0.9395 | |
| 53 | L | A | -0.5172 | |
| 54 | Q | A | -0.2124 | |
| 55 | Y | A | 0.0000 | |
| 56 | F | A | 0.0602 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -1.2634 | |
| 59 | R | A | -2.2794 | |
| 60 | G | A | -2.3222 | |
| 61 | D | A | -2.9450 | |
| 62 | Y | A | -1.9698 | |
| 63 | A | A | -1.8256 | |
| 64 | D | A | -2.1047 | |
| 65 | H | A | 0.0000 | |
| 66 | Q | A | -2.1393 | |
| 67 | Q | A | -1.8608 | |
| 68 | W | A | 0.0000 | |
| 69 | M | A | -0.8652 | |
| 70 | G | A | -0.9770 | |
| 71 | L | A | -0.2720 | |
| 72 | S | A | -0.9091 | |
| 73 | D | A | -2.0489 | |
| 74 | S | A | -1.6261 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -1.5156 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | R | A | -0.6989 | |
| 80 | L | A | -0.5344 | |
| 81 | I | A | 0.0000 | |
| 82 | P | A | -0.6093 | |
| 83 | H | A | -0.6750 | |
| 84 | S | A | -0.7847 | |
| 85 | G | A | -0.8763 | |
| 86 | S | A | -1.1783 | |
| 87 | H | A | 0.0000 | |
| 88 | R | A | -2.5173 | |
| 89 | I | A | 0.0000 | |
| 90 | R | A | -1.0015 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | -1.6895 | |
| 93 | E | A | -2.2326 | |
| 94 | R | A | -3.8332 | |
| 95 | E | A | -3.5228 | |
| 96 | D | A | -2.8527 | |
| 97 | Y | A | -2.3889 | |
| 98 | R | A | -3.2904 | |
| 99 | G | A | -2.2758 | |
| 100 | Q | A | -1.3764 | |
| 101 | M | A | -0.4629 | |
| 102 | I | A | -0.5414 | |
| 103 | E | A | -1.9153 | |
| 104 | F | A | -1.7390 | |
| 105 | T | A | -2.2712 | |
| 106 | E | A | -2.9081 | |
| 107 | D | A | -2.2432 | |
| 108 | C | A | 0.0000 | |
| 109 | S | A | -1.4327 | |
| 110 | C | A | -1.0932 | |
| 111 | L | A | 0.0000 | |
| 112 | Q | A | -2.1171 | |
| 113 | D | A | -2.9461 | |
| 114 | R | A | -2.6057 | |
| 115 | F | A | -1.8846 | |
| 116 | R | A | -2.4476 | |
| 117 | F | A | -1.2311 | |
| 118 | N | A | -1.1080 | |
| 119 | E | A | -1.8973 | |
| 120 | I | A | 0.0000 | |
| 121 | H | A | -2.6645 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | D | A | -1.5279 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -0.9781 | |
| 127 | E | A | -1.5347 | |
| 128 | G | A | -1.1259 | |
| 129 | S | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | -0.9320 | |
| 135 | L | A | 0.1103 | |
| 136 | S | A | -0.7687 | |
| 137 | N | A | -1.5021 | |
| 138 | Y | A | -1.0493 | |
| 139 | R | A | -1.5506 | |
| 140 | G | A | -0.7318 | |
| 141 | R | A | -0.5895 | |
| 142 | Q | A | 0.0000 | |
| 143 | Y | A | 0.0000 | |
| 144 | L | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | -0.2469 | |
| 147 | P | A | -0.9722 | |
| 148 | G | A | -1.2370 | |
| 149 | D | A | -2.1373 | |
| 150 | Y | A | -2.2505 | |
| 151 | R | A | -3.2701 | |
| 152 | R | A | -2.8948 | |
| 153 | Y | A | -2.0794 | |
| 154 | Q | A | -2.6233 | |
| 155 | D | A | -2.7624 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.7507 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -1.3753 | |
| 160 | N | A | -2.0632 | |
| 161 | A | A | 0.0000 | |
| 162 | R | A | -1.7748 | |
| 163 | V | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -1.4222 | |
| 168 | R | A | -1.4651 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | 0.0456 | |
| 171 | D | A | 0.1477 | |
| 172 | F | A | 1.4466 | |
| 173 | S | A | 0.0138 |