Project name: query_structure

Status: done

Started: 2026-03-16 21:44:14
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVAIHGVKGGASSPPLIARFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:32)
Show buried residues

Minimal score value
-3.104
Maximal score value
1.2144
Average score
-0.7487
Total score value
-67.3841

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0696
2 L A 0.4294
3 P A -0.1479
4 A A -0.5165
5 P A 0.0000
6 K A -1.8419
7 N A -1.3330
8 L A -0.0386
9 V A 0.9720
10 V A 0.0693
11 S A -0.5709
12 R A -1.9996
13 V A -1.0582
14 T A -1.8156
15 E A -3.1040
16 D A -2.8208
17 S A -2.1051
18 A A 0.0000
19 R A -1.1522
20 L A 0.0000
21 S A -0.3432
22 W A 0.0000
23 T A -1.2994
24 A A -1.4071
25 P A -1.3836
26 D A -2.2735
27 A A -1.4397
28 A A -1.1892
29 F A 0.0000
30 D A -2.5724
31 S A 0.0000
32 F A 0.0000
33 N A -0.8418
34 I A 0.0000
35 A A 0.0000
36 Y A 0.3145
37 W A -0.3761
38 E A -0.9905
39 P A -0.7529
40 G A 0.1085
41 I A 1.2144
42 G A -0.1819
43 G A -0.5154
44 E A -1.3269
45 A A -0.2087
46 I A 1.0222
47 W A 1.0187
48 L A 0.0502
49 R A -1.6514
50 V A 0.0000
51 P A -1.5672
52 G A 0.0000
53 S A -1.6185
54 E A -1.7329
55 R A -1.1884
56 S A -0.6614
57 Y A -0.7700
58 D A -1.6346
59 L A 0.0000
60 T A -1.3597
61 G A -1.5277
62 L A 0.0000
63 K A -3.0811
64 P A -2.5857
65 G A -1.9191
66 T A -2.0028
67 E A -2.4067
68 Y A 0.0000
69 K A -1.0907
70 V A 0.0000
71 A A 0.0000
72 I A 0.0000
73 H A -0.4317
74 G A 0.0000
75 V A -1.3606
76 K A -1.8049
77 G A -1.4568
78 G A -1.1750
79 A A -0.6646
80 S A -0.4352
81 S A 0.0000
82 P A 0.1464
83 P A 0.0110
84 L A 0.3502
85 I A 0.9723
86 A A 0.0108
87 R A -1.7281
88 F A 0.0000
89 T A -1.7055
90 T A -1.9767
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Laboratory of Theory of Biopolymers 2018