| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPGIGGEAIWLRVPGSERSYDLTGLKPGTEYKVAIHGVKGGASSPPLIARFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:30)
[INFO] Main: Simulation completed successfully. (00:01:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0696 | |
| 2 | L | A | 0.4294 | |
| 3 | P | A | -0.1479 | |
| 4 | A | A | -0.5165 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -1.8419 | |
| 7 | N | A | -1.3330 | |
| 8 | L | A | -0.0386 | |
| 9 | V | A | 0.9720 | |
| 10 | V | A | 0.0693 | |
| 11 | S | A | -0.5709 | |
| 12 | R | A | -1.9996 | |
| 13 | V | A | -1.0582 | |
| 14 | T | A | -1.8156 | |
| 15 | E | A | -3.1040 | |
| 16 | D | A | -2.8208 | |
| 17 | S | A | -2.1051 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.1522 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3432 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2994 | |
| 24 | A | A | -1.4071 | |
| 25 | P | A | -1.3836 | |
| 26 | D | A | -2.2735 | |
| 27 | A | A | -1.4397 | |
| 28 | A | A | -1.1892 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.5724 | |
| 31 | S | A | 0.0000 | |
| 32 | F | A | 0.0000 | |
| 33 | N | A | -0.8418 | |
| 34 | I | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | Y | A | 0.3145 | |
| 37 | W | A | -0.3761 | |
| 38 | E | A | -0.9905 | |
| 39 | P | A | -0.7529 | |
| 40 | G | A | 0.1085 | |
| 41 | I | A | 1.2144 | |
| 42 | G | A | -0.1819 | |
| 43 | G | A | -0.5154 | |
| 44 | E | A | -1.3269 | |
| 45 | A | A | -0.2087 | |
| 46 | I | A | 1.0222 | |
| 47 | W | A | 1.0187 | |
| 48 | L | A | 0.0502 | |
| 49 | R | A | -1.6514 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.5672 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6185 | |
| 54 | E | A | -1.7329 | |
| 55 | R | A | -1.1884 | |
| 56 | S | A | -0.6614 | |
| 57 | Y | A | -0.7700 | |
| 58 | D | A | -1.6346 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3597 | |
| 61 | G | A | -1.5277 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0811 | |
| 64 | P | A | -2.5857 | |
| 65 | G | A | -1.9191 | |
| 66 | T | A | -2.0028 | |
| 67 | E | A | -2.4067 | |
| 68 | Y | A | 0.0000 | |
| 69 | K | A | -1.0907 | |
| 70 | V | A | 0.0000 | |
| 71 | A | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | H | A | -0.4317 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.3606 | |
| 76 | K | A | -1.8049 | |
| 77 | G | A | -1.4568 | |
| 78 | G | A | -1.1750 | |
| 79 | A | A | -0.6646 | |
| 80 | S | A | -0.4352 | |
| 81 | S | A | 0.0000 | |
| 82 | P | A | 0.1464 | |
| 83 | P | A | 0.0110 | |
| 84 | L | A | 0.3502 | |
| 85 | I | A | 0.9723 | |
| 86 | A | A | 0.0108 | |
| 87 | R | A | -1.7281 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.7055 | |
| 90 | T | A | -1.9767 |