| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDSPRWWWVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGMPGLKIPLKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:31)
[INFO] Main: Simulation completed successfully. (00:01:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.5552 | |
| 2 | S | A | -0.0056 | |
| 3 | D | A | -0.6005 | |
| 4 | V | A | -0.8581 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.2750 | |
| 7 | D | A | -2.8458 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9446 | |
| 10 | V | A | 0.0711 | |
| 11 | V | A | 1.5177 | |
| 12 | A | A | 0.8774 | |
| 13 | A | A | 0.2926 | |
| 14 | T | A | -0.5370 | |
| 15 | P | A | -1.1361 | |
| 16 | T | A | -1.0063 | |
| 17 | S | A | -0.5428 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7168 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.8467 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.1435 | |
| 24 | S | A | -1.3213 | |
| 25 | P | A | 0.0000 | |
| 26 | R | A | -1.3068 | |
| 27 | W | A | 0.5350 | |
| 28 | W | A | 1.1685 | |
| 29 | W | A | 1.1373 | |
| 30 | V | A | -0.0237 | |
| 31 | R | A | -1.1446 | |
| 32 | Y | A | -0.7468 | |
| 33 | Y | A | 0.0000 | |
| 34 | R | A | -0.8361 | |
| 35 | I | A | 0.0000 | |
| 36 | T | A | -0.6023 | |
| 37 | Y | A | -0.3512 | |
| 38 | G | A | 0.0000 | |
| 39 | E | A | -1.5478 | |
| 40 | T | A | -1.2216 | |
| 41 | G | A | -1.2216 | |
| 42 | G | A | -1.3380 | |
| 43 | N | A | -1.5205 | |
| 44 | S | A | -0.8648 | |
| 45 | P | A | -0.3667 | |
| 46 | V | A | 0.3474 | |
| 47 | Q | A | -1.0618 | |
| 48 | E | A | -1.6508 | |
| 49 | F | A | -0.7858 | |
| 50 | T | A | -0.3663 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.1219 | |
| 53 | G | A | -0.9371 | |
| 54 | S | A | -1.1214 | |
| 55 | K | A | -1.7204 | |
| 56 | S | A | -1.0416 | |
| 57 | T | A | -0.5759 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2294 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6626 | |
| 62 | G | A | -1.0344 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3662 | |
| 65 | P | A | -1.6574 | |
| 66 | G | A | -1.4302 | |
| 67 | V | A | -1.4146 | |
| 68 | D | A | -2.0396 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.7534 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | -0.1412 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.0220 | |
| 75 | A | A | -0.1444 | |
| 76 | V | A | 0.1109 | |
| 77 | T | A | 0.5631 | |
| 78 | G | A | -0.1461 | |
| 79 | M | A | 0.2606 | |
| 80 | P | A | -0.3460 | |
| 81 | G | A | -0.2954 | |
| 82 | L | A | 0.4096 | |
| 83 | K | A | -0.5154 | |
| 84 | I | A | 0.9158 | |
| 85 | P | A | 0.0122 | |
| 86 | L | A | -0.2519 | |
| 87 | K | A | -1.3467 | |
| 88 | P | A | -0.8105 | |
| 89 | I | A | -0.4445 | |
| 90 | S | A | -0.6519 | |
| 91 | I | A | -0.7051 | |
| 92 | N | A | -1.6955 | |
| 93 | Y | A | -1.4347 | |
| 94 | R | A | -2.5036 | |
| 95 | T | A | -1.5057 |