| Chain sequence(s) |
A: MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGVGILARNLVPMVATVQGQNLKAAYGPVFMCLGGLLTMVAGAVWLAAYVLCCYVLEETSVMLAKRPLIAAYVVTHTYLEPGPVTAQVVLQAAAYAIQNAGLCTLVAMLLEETIFAAYSSAFTITDQVPFSVQLRALDAAYAWDFGSVGGVFTSVGKAVHQAAYSPLTGGILGFVFTLTVPSERQLYPYDVPDYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:09)
[INFO] Main: Simulation completed successfully. (00:03:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -2.1882 | |
| 2 | Q | A | -2.5012 | |
| 3 | I | A | 0.0000 | |
| 4 | F | A | -0.7564 | |
| 5 | V | A | 0.0000 | |
| 6 | K | A | -0.7733 | |
| 7 | T | A | 0.0000 | |
| 8 | L | A | 1.0656 | |
| 9 | T | A | 0.4155 | |
| 10 | G | A | -0.8755 | |
| 11 | K | A | -1.6069 | |
| 12 | T | A | -0.8809 | |
| 13 | I | A | 0.0000 | |
| 14 | T | A | -1.0067 | |
| 15 | L | A | 0.0000 | |
| 16 | E | A | -2.5174 | |
| 17 | V | A | 0.0000 | |
| 18 | E | A | -2.8413 | |
| 19 | P | A | -1.9690 | |
| 20 | S | A | -1.5258 | |
| 21 | D | A | -1.8543 | |
| 22 | T | A | -2.7706 | |
| 23 | I | A | 0.0000 | |
| 24 | E | A | -3.7686 | |
| 25 | N | A | -2.6880 | |
| 26 | V | A | 0.0000 | |
| 27 | K | A | 0.0000 | |
| 28 | A | A | -2.3342 | |
| 29 | K | A | -2.7367 | |
| 30 | I | A | 0.0000 | |
| 31 | Q | A | -2.6834 | |
| 32 | D | A | -3.3818 | |
| 33 | K | A | -3.2735 | |
| 34 | E | A | -2.3318 | |
| 35 | G | A | -1.9525 | |
| 36 | I | A | -1.2678 | |
| 37 | P | A | -1.2658 | |
| 38 | P | A | -2.1234 | |
| 39 | D | A | -2.6565 | |
| 40 | Q | A | -1.6393 | |
| 41 | Q | A | 0.0000 | |
| 42 | R | A | -2.0951 | |
| 43 | L | A | 0.0000 | |
| 44 | I | A | -1.3143 | |
| 45 | F | A | -0.7094 | |
| 46 | A | A | -0.6708 | |
| 47 | G | A | -1.3687 | |
| 48 | K | A | -2.5339 | |
| 49 | Q | A | -2.6943 | |
| 50 | L | A | 0.0000 | |
| 51 | E | A | -3.8405 | |
| 52 | D | A | -3.8934 | |
| 53 | G | A | -2.8825 | |
| 54 | R | A | -3.3510 | |
| 55 | T | A | -2.7588 | |
| 56 | L | A | 0.0000 | |
| 57 | S | A | -2.1151 | |
| 58 | D | A | -2.3524 | |
| 59 | Y | A | -1.9861 | |
| 60 | N | A | -2.1932 | |
| 61 | I | A | 0.0000 | |
| 62 | Q | A | -3.0880 | |
| 63 | K | A | -3.7354 | |
| 64 | E | A | -2.9389 | |
| 65 | S | A | -1.8447 | |
| 66 | T | A | -0.8541 | |
| 67 | L | A | 0.0000 | |
| 68 | H | A | -0.5392 | |
| 69 | L | A | 0.0000 | |
| 70 | V | A | 0.3158 | |
| 71 | L | A | 0.0321 | |
| 72 | R | A | -0.9679 | |
| 73 | L | A | 0.6777 | |
| 74 | R | A | -0.9040 | |
| 75 | G | A | 0.5526 | |
| 76 | V | A | 1.4740 | |
| 77 | G | A | 0.3228 | |
| 78 | I | A | 0.6578 | |
| 79 | L | A | 1.5062 | |
| 80 | A | A | 0.8881 | |
| 81 | R | A | -0.5799 | |
| 82 | N | A | -0.0713 | |
| 83 | L | A | 2.0590 | |
| 84 | V | A | 2.1616 | |
| 85 | P | A | 0.9956 | |
| 86 | M | A | 1.8073 | |
| 87 | V | A | 1.9339 | |
| 88 | A | A | 1.0962 | |
| 89 | T | A | 0.4906 | |
| 90 | V | A | 0.4666 | |
| 91 | Q | A | -1.3500 | |
| 92 | G | A | -1.5496 | |
| 93 | Q | A | -2.1941 | |
| 94 | N | A | -2.1536 | |
| 95 | L | A | -0.7989 | |
| 96 | K | A | -1.7736 | |
| 97 | A | A | -0.5501 | |
| 98 | A | A | 0.3872 | |
| 99 | Y | A | 1.6167 | |
| 100 | G | A | 1.1775 | |
| 101 | P | A | 1.5879 | |
| 102 | V | A | 3.1421 | |
| 103 | F | A | 2.8550 | |
| 104 | M | A | 2.7918 | |
| 105 | C | A | 2.7467 | |
| 106 | L | A | 2.9187 | |
| 107 | G | A | 2.1744 | |
| 108 | G | A | 1.9571 | |
| 109 | L | A | 2.6964 | |
| 110 | L | A | 2.4615 | |
| 111 | T | A | 1.7238 | |
| 112 | M | A | 2.4152 | |
| 113 | V | A | 2.7426 | |
| 114 | A | A | 2.1296 | |
| 115 | G | A | 1.9264 | |
| 116 | A | A | 2.4583 | |
| 117 | V | A | 3.2238 | |
| 118 | W | A | 3.3332 | |
| 119 | L | A | 3.4576 | |
| 120 | A | A | 2.7764 | |
| 121 | A | A | 2.9443 | |
| 122 | Y | A | 3.7205 | |
| 123 | V | A | 3.6052 | |
| 124 | L | A | 4.0147 | |
| 125 | C | A | 3.1500 | |
| 126 | C | A | 2.2328 | |
| 127 | Y | A | 2.8189 | |
| 128 | V | A | 3.1640 | |
| 129 | L | A | 1.8148 | |
| 130 | E | A | -0.8446 | |
| 131 | E | A | -1.1078 | |
| 132 | T | A | 0.2349 | |
| 133 | S | A | -0.1257 | |
| 134 | V | A | 0.1399 | |
| 135 | M | A | 0.3466 | |
| 136 | L | A | 1.1466 | |
| 137 | A | A | 0.0507 | |
| 138 | K | A | -1.1225 | |
| 139 | R | A | -0.4620 | |
| 140 | P | A | 0.1612 | |
| 141 | L | A | 1.4907 | |
| 142 | I | A | 2.3899 | |
| 143 | A | A | 2.1737 | |
| 144 | A | A | 1.7730 | |
| 145 | Y | A | 2.4260 | |
| 146 | V | A | 3.1755 | |
| 147 | V | A | 3.1655 | |
| 148 | T | A | 1.8044 | |
| 149 | H | A | 0.7261 | |
| 150 | T | A | 1.2172 | |
| 151 | Y | A | 1.6990 | |
| 152 | L | A | 0.8048 | |
| 153 | E | A | -1.3859 | |
| 154 | P | A | -0.6824 | |
| 155 | G | A | -0.2397 | |
| 156 | P | A | 0.1660 | |
| 157 | V | A | 1.5770 | |
| 158 | T | A | 0.7645 | |
| 159 | A | A | 0.5406 | |
| 160 | Q | A | 0.1015 | |
| 161 | V | A | 1.1027 | |
| 162 | V | A | 1.1944 | |
| 163 | L | A | 1.1368 | |
| 164 | Q | A | -0.0116 | |
| 165 | A | A | 0.8006 | |
| 166 | A | A | 1.1156 | |
| 167 | A | A | 0.5181 | |
| 168 | Y | A | 0.3498 | |
| 169 | A | A | 0.5613 | |
| 170 | I | A | 1.1984 | |
| 171 | Q | A | -0.5869 | |
| 172 | N | A | -0.7595 | |
| 173 | A | A | 0.1134 | |
| 174 | G | A | 0.8391 | |
| 175 | L | A | 2.2025 | |
| 176 | C | A | 2.0154 | |
| 177 | T | A | 1.4888 | |
| 178 | L | A | 0.0000 | |
| 179 | V | A | 2.1059 | |
| 180 | A | A | 0.9627 | |
| 181 | M | A | 0.3940 | |
| 182 | L | A | 0.9038 | |
| 183 | L | A | 0.6073 | |
| 184 | E | A | -0.8575 | |
| 185 | E | A | -0.8071 | |
| 186 | T | A | 0.2929 | |
| 187 | I | A | 1.2420 | |
| 188 | F | A | 1.8559 | |
| 189 | A | A | 1.0786 | |
| 190 | A | A | 1.3135 | |
| 191 | Y | A | 2.3971 | |
| 192 | S | A | 1.7618 | |
| 193 | S | A | 1.4427 | |
| 194 | A | A | 1.7442 | |
| 195 | F | A | 2.3114 | |
| 196 | T | A | 1.1745 | |
| 197 | I | A | 1.2560 | |
| 198 | T | A | 0.2769 | |
| 199 | D | A | -1.5705 | |
| 200 | Q | A | -1.2215 | |
| 201 | V | A | 0.5053 | |
| 202 | P | A | 0.8865 | |
| 203 | F | A | 2.0444 | |
| 204 | S | A | 1.2185 | |
| 205 | V | A | 1.5649 | |
| 206 | Q | A | 0.7711 | |
| 207 | L | A | 0.4647 | |
| 208 | R | A | -0.9989 | |
| 209 | A | A | -0.2401 | |
| 210 | L | A | 0.3186 | |
| 211 | D | A | -0.9873 | |
| 212 | A | A | -0.1604 | |
| 213 | A | A | 0.4593 | |
| 214 | Y | A | 0.8853 | |
| 215 | A | A | 0.6718 | |
| 216 | W | A | 0.9947 | |
| 217 | D | A | -0.2175 | |
| 218 | F | A | 1.4390 | |
| 219 | G | A | -0.0885 | |
| 220 | S | A | 0.5337 | |
| 221 | V | A | 2.0995 | |
| 222 | G | A | 0.7223 | |
| 223 | G | A | 1.0960 | |
| 224 | V | A | 2.2382 | |
| 225 | F | A | 2.5175 | |
| 226 | T | A | 0.8056 | |
| 227 | S | A | 0.6211 | |
| 228 | V | A | 1.8927 | |
| 229 | G | A | 0.3002 | |
| 230 | K | A | -1.4129 | |
| 231 | A | A | -0.5585 | |
| 232 | V | A | 0.1360 | |
| 233 | H | A | -1.2498 | |
| 234 | Q | A | -1.4756 | |
| 235 | A | A | -0.2613 | |
| 236 | A | A | 0.2561 | |
| 237 | Y | A | 0.9501 | |
| 238 | S | A | 0.5965 | |
| 239 | P | A | 0.8341 | |
| 240 | L | A | 1.8040 | |
| 241 | T | A | 1.5102 | |
| 242 | G | A | 1.2288 | |
| 243 | G | A | 1.3915 | |
| 244 | I | A | 3.2594 | |
| 245 | L | A | 2.8846 | |
| 246 | G | A | 2.3505 | |
| 247 | F | A | 3.9010 | |
| 248 | V | A | 4.1437 | |
| 249 | F | A | 3.8880 | |
| 250 | T | A | 3.0426 | |
| 251 | L | A | 3.3018 | |
| 252 | T | A | 2.5411 | |
| 253 | V | A | 2.3321 | |
| 254 | P | A | 0.2307 | |
| 255 | S | A | -1.0834 | |
| 256 | E | A | -2.3549 | |
| 257 | R | A | -2.7047 | |
| 258 | Q | A | -1.7127 | |
| 259 | L | A | 0.4724 | |
| 260 | Y | A | 1.1475 | |
| 261 | P | A | 0.6090 | |
| 262 | Y | A | 1.3832 | |
| 263 | D | A | -0.3917 | |
| 264 | V | A | 1.0487 | |
| 265 | P | A | -0.0882 | |
| 266 | D | A | -0.9625 | |
| 267 | Y | A | 0.6845 | |
| 268 | A | A | 0.2022 |