| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | IG93C,LA45C,WH47C,YL95C,LY115C,YP59C,GE9C,TS117C,TV114C,LT11C,GK10C,GC113C,ED6C,VR5C,WD110C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 33.7761 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:25)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:31)
[INFO] Main: Simulation completed successfully. (00:02:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.0240 | |
| 2 | V | C | -1.2725 | |
| 3 | Q | C | -2.3991 | |
| 4 | L | C | 0.0000 | |
| 5 | R | C | -2.6618 | mutated: VR5C |
| 6 | D | C | 0.0000 | mutated: ED6C |
| 7 | S | C | -1.1443 | |
| 8 | G | C | -1.1564 | |
| 9 | E | C | -1.3444 | mutated: GE9C |
| 10 | K | C | -1.6073 | mutated: GK10C |
| 11 | T | C | -1.0387 | mutated: LT11C |
| 12 | V | C | -1.2830 | |
| 13 | Q | C | -1.7255 | |
| 14 | P | C | -1.6780 | |
| 15 | G | C | -1.4188 | |
| 16 | G | C | -1.1986 | |
| 17 | S | C | -1.3266 | |
| 18 | L | C | 0.0000 | |
| 19 | R | C | -2.2414 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.9613 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -1.2225 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -0.6185 | |
| 26 | D | C | 0.0000 | |
| 27 | F | C | 1.5423 | |
| 28 | T | C | 0.2557 | |
| 29 | F | C | 0.0000 | |
| 30 | R | C | -2.0140 | |
| 31 | S | C | -0.8631 | |
| 32 | Y | C | -1.1748 | |
| 33 | E | C | -1.0282 | |
| 34 | M | C | 0.0000 | |
| 35 | S | C | 0.0000 | |
| 36 | W | C | 0.0000 | |
| 37 | V | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -1.4416 | |
| 40 | A | C | -1.5561 | |
| 41 | P | C | -1.4616 | |
| 42 | G | C | -1.6167 | |
| 43 | K | C | -2.5057 | |
| 44 | G | C | -1.7894 | |
| 45 | A | C | -1.3506 | mutated: LA45C |
| 46 | E | C | -1.5572 | |
| 47 | H | C | -0.9286 | mutated: WH47C |
| 48 | V | C | 0.0000 | |
| 49 | S | C | 0.0000 | |
| 50 | A | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | S | C | -0.6977 | |
| 53 | G | C | -1.2166 | |
| 54 | S | C | -1.2238 | |
| 55 | G | C | -1.0940 | |
| 56 | G | C | -0.7666 | |
| 57 | S | C | -0.5980 | |
| 58 | T | C | -0.3262 | |
| 59 | P | C | -0.4112 | mutated: YP59C |
| 60 | Y | C | -0.9388 | |
| 61 | A | C | -1.5280 | |
| 62 | D | C | -2.4404 | |
| 63 | S | C | -1.7035 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.5087 | |
| 66 | G | C | -1.6087 | |
| 67 | R | C | 0.0000 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.7799 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.5696 | |
| 72 | R | C | -1.3595 | |
| 73 | D | C | -1.9785 | |
| 74 | N | C | -2.1871 | |
| 75 | S | C | -1.7905 | |
| 76 | K | C | -2.3156 | |
| 77 | N | C | -1.6464 | |
| 78 | T | C | 0.0000 | |
| 79 | L | C | 0.0000 | |
| 80 | Y | C | -0.6336 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.2815 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.3770 | |
| 85 | S | C | -1.2552 | |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -2.4879 | |
| 88 | A | C | -1.9143 | |
| 89 | E | C | -2.3534 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -1.0102 | |
| 92 | A | C | 0.0000 | |
| 93 | G | C | -0.0335 | mutated: IG93C |
| 94 | Y | C | 0.0000 | |
| 95 | L | C | -0.6716 | mutated: YL95C |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | R | C | 0.0000 | |
| 99 | L | C | 0.0000 | |
| 100 | R | C | -2.9887 | |
| 101 | D | C | -3.2274 | |
| 102 | G | C | -1.9775 | |
| 103 | F | C | -1.1951 | |
| 104 | N | C | -2.3198 | |
| 105 | K | C | -3.0530 | |
| 106 | G | C | -1.6421 | |
| 107 | F | C | -0.9356 | |
| 108 | D | C | -1.4115 | |
| 109 | Y | C | -1.2751 | |
| 110 | D | C | -2.1874 | mutated: WD110C |
| 111 | G | C | 0.0000 | |
| 112 | Q | C | -2.1287 | |
| 113 | C | C | -0.8029 | mutated: GC113C |
| 114 | V | C | 0.0000 | mutated: TV114C |
| 115 | Y | C | 0.6097 | mutated: LY115C |
| 116 | V | C | 0.0000 | |
| 117 | S | C | -0.9004 | mutated: TS117C |
| 118 | V | C | 0.0000 | |
| 119 | S | C | -1.1465 | |
| 120 | S | C | -1.0954 |