| Chain sequence(s) |
A: DIQMTQSPSSLSASVGDRVSITCRPSQSISNYLNWYQQKPGTAPKLLISAASTLQVGVPSRFSGSGSGTDFTLTINGLQPEDVATYYCQQSYSTIFTFGPGTKVNVK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.5264 | |
| 2 | I | A | 0.0000 | |
| 3 | Q | A | -1.6978 | |
| 4 | M | A | 0.0000 | |
| 5 | T | A | -0.8264 | |
| 6 | Q | A | 0.0000 | |
| 7 | S | A | -0.7557 | |
| 8 | P | A | -0.6318 | |
| 9 | S | A | -0.8565 | |
| 10 | S | A | -1.2210 | |
| 11 | L | A | -0.9948 | |
| 12 | S | A | -1.1936 | |
| 13 | A | A | -1.1153 | |
| 14 | S | A | -0.6820 | |
| 15 | V | A | 0.3213 | |
| 16 | G | A | -0.7649 | |
| 17 | D | A | -1.7497 | |
| 18 | R | A | -2.4979 | |
| 19 | V | A | 0.0000 | |
| 20 | S | A | -0.8366 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -0.8941 | |
| 23 | C | A | 0.0000 | |
| 24 | R | A | -2.6837 | |
| 25 | P | A | 0.0000 | |
| 26 | S | A | -1.8896 | |
| 27 | Q | A | -1.9138 | |
| 28 | S | A | -1.0675 | |
| 29 | I | A | 0.0000 | |
| 30 | S | A | -0.4358 | |
| 31 | N | A | -0.4750 | |
| 32 | Y | A | 0.9509 | |
| 33 | L | A | 0.0000 | |
| 34 | N | A | 0.3659 | |
| 35 | W | A | 0.0000 | |
| 36 | Y | A | -0.0337 | |
| 37 | Q | A | 0.0000 | |
| 38 | Q | A | -1.2618 | |
| 39 | K | A | -1.5766 | |
| 40 | P | A | -0.8499 | |
| 41 | G | A | -0.8542 | |
| 42 | T | A | -0.9059 | |
| 43 | A | A | -0.7198 | |
| 44 | P | A | -1.0527 | |
| 45 | K | A | -1.4830 | |
| 46 | L | A | -0.0227 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | S | A | 0.1203 | |
| 50 | A | A | 0.0024 | |
| 51 | A | A | 0.0000 | |
| 52 | S | A | -0.3456 | |
| 53 | T | A | 0.0909 | |
| 54 | L | A | 0.6865 | |
| 55 | Q | A | 0.6427 | |
| 56 | V | A | 1.6046 | |
| 57 | G | A | 0.4276 | |
| 58 | V | A | 0.2855 | |
| 59 | P | A | -0.1167 | |
| 60 | S | A | -0.2849 | |
| 61 | R | A | -0.9578 | |
| 62 | F | A | 0.0000 | |
| 63 | S | A | -0.3704 | |
| 64 | G | A | -0.3293 | |
| 65 | S | A | -0.8780 | |
| 66 | G | A | -1.4282 | |
| 67 | S | A | -1.2939 | |
| 68 | G | A | -1.3030 | |
| 69 | T | A | -2.0107 | |
| 70 | D | A | -2.7854 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.9215 | |
| 73 | L | A | 0.0000 | |
| 74 | T | A | -0.7840 | |
| 75 | I | A | 0.0000 | |
| 76 | N | A | -1.7229 | |
| 77 | G | A | -1.3047 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -0.8639 | |
| 80 | P | A | -0.9614 | |
| 81 | E | A | -1.6370 | |
| 82 | D | A | 0.0000 | |
| 83 | V | A | -0.9699 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | -1.1433 | |
| 86 | Y | A | 0.0000 | |
| 87 | Y | A | 0.1902 | |
| 88 | C | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | Q | A | 0.0000 | |
| 91 | S | A | 1.8013 | |
| 92 | Y | A | 1.8816 | |
| 93 | S | A | 1.3784 | |
| 94 | T | A | 1.3905 | |
| 95 | I | A | 2.6699 | |
| 96 | F | A | 3.0021 | |
| 97 | T | A | 1.6335 | |
| 98 | F | A | 1.6680 | |
| 99 | G | A | 0.0000 | |
| 100 | P | A | -0.1021 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | K | A | -2.1615 | |
| 104 | V | A | 0.0000 | |
| 105 | N | A | -1.8556 | |
| 106 | V | A | -1.0291 | |
| 107 | K | A | -1.6180 |