Project name: rank_12

Status: done

Started: 2026-06-03 09:17:04
Settings
Chain sequence(s) B: SKRWSVEEVIEMIRRYGLWWWSRAKTPHERNQVYLWVYDFAHWAAHRLKASNEEWEELWKAMWEIMESLP
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:14)
Show buried residues

Minimal score value
-3.6214
Maximal score value
0.9869
Average score
-1.3008
Total score value
-91.0589

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S B -1.3727
2 K B -2.5949
3 R B -3.0682
4 W B -1.6125
5 S B -1.4873
6 V B -1.5010
7 E B -2.6362
8 E B -2.3954
9 V B 0.0000
10 I B -1.7849
11 E B -2.3599
12 M B -1.2416
13 I B 0.0000
14 R B -1.1334
15 R B -1.0545
16 Y B 0.5299
17 G B 0.0000
18 L B 0.5033
19 W B 0.9254
20 W B 0.1901
21 W B -0.6114
22 S B -0.7997
23 R B -2.1951
24 A B 0.0000
25 K B -2.7821
26 T B -2.3013
27 P B -2.1114
28 H B -2.6470
29 E B -2.9225
30 R B -2.6717
31 N B -2.0637
32 Q B -1.2401
33 V B 0.0000
34 Y B 0.2807
35 L B 0.9869
36 W B 0.8148
37 V B 0.0000
38 Y B 0.7602
39 D B -0.5185
40 F B 0.1823
41 A B 0.0000
42 H B -0.6436
43 W B -0.6542
44 A B 0.0000
45 A B 0.0000
46 H B -2.1212
47 R B -2.7958
48 L B -2.4075
49 K B -2.8638
50 A B -2.4163
51 S B -2.2666
52 N B -3.0430
53 E B -3.4423
54 E B -2.8641
55 W B -2.7087
56 E B -3.6214
57 E B -3.4325
58 L B 0.0000
59 W B -1.7893
60 K B -2.5465
61 A B -1.9889
62 M B 0.0000
63 W B -0.8907
64 E B -2.4829
65 I B 0.0000
66 M B 0.0000
67 E B -2.2428
68 S B -1.4324
69 L B 0.0000
70 P B -0.4710
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018