Project name: GGGHKGG12

Status: done

Started: 2026-02-23 06:32:34
Settings
Chain sequence(s) A: GGGHKGG
C: GGGHKGG
B: GGGHKGG
E: GGGHKGG
D: GGGHKGG
G: GGGHKGG
F: GGGHKGG
I: GGGHKGG
H: GGGHKGG
K: GGGHKGG
J: GGGHKGG
L: GGGHKGG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:26)
Show buried residues

Minimal score value
-3.854
Maximal score value
-1.3095
Average score
-2.5313
Total score value
-212.6264

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.8431
2 G A -2.0245
3 G A -2.3119
4 H A -3.0454
5 K A -2.9517
6 G A -2.1496
7 G A -1.5433
1 G B -1.8087
2 G B -2.0346
3 G B -2.6368
4 H B -3.3601
5 K B -3.6782
6 G B -2.6647
7 G B -1.8044
1 G C -1.9468
2 G C -2.3279
3 G C -2.8238
4 H C -3.3065
5 K C -3.5122
6 G C -2.5173
7 G C -1.4258
1 G D -1.8940
2 G D -2.2302
3 G D -2.5460
4 H D -3.3737
5 K D -3.5920
6 G D -2.1228
7 G D -1.3956
1 G E -1.9183
2 G E -2.5263
3 G E -2.6590
4 H E -3.2308
5 K E -3.1217
6 G E -2.6297
7 G E -1.3844
1 G F -1.9129
2 G F -2.1874
3 G F -2.6385
4 H F -3.2185
5 K F -2.9659
6 G F -2.2903
7 G F -1.3095
1 G G -2.0946
2 G G -2.3839
3 G G -2.8554
4 H G -3.2300
5 K G -3.1287
6 G G -2.1809
7 G G -1.3304
1 G H -1.9573
2 G H -2.0963
3 G H -2.5184
4 H H -3.1948
5 K H -3.1200
6 G H -2.3790
7 G H -1.5158
1 G I -2.0717
2 G I -2.4783
3 G I -2.8722
4 H I -3.8182
5 K I -3.8064
6 G I -2.6188
7 G I -1.7749
1 G J -1.9462
2 G J -2.4275
3 G J -2.9475
4 H J -3.7110
5 K J -3.6637
6 G J -2.5541
7 G J -1.8135
1 G K -1.9473
2 G K -2.2875
3 G K -3.0424
4 H K -3.5823
5 K K -3.8540
6 G K -2.5743
7 G K -1.9220
1 G L -1.5119
2 G L -2.0045
3 G L -2.8208
4 H L -3.4413
5 K L -3.4944
6 G L -2.9348
7 G L -1.8546
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Laboratory of Theory of Biopolymers 2018