Chain sequence(s) |
A: KQWQKQWQKLLKQW
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | QI8A,QI2A,QI4A,QI13A,QI6A |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.0326252 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:11) [INFO] FoldX: Starting FoldX energy minimalization (00:01:33) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:42) [INFO] Main: Simulation completed successfully. (00:01:42) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | K | A | 0.2209 | |
2 | I | A | 2.3092 | mutated: QI2A |
3 | W | A | 2.7381 | |
4 | I | A | 2.7014 | mutated: QI4A |
5 | K | A | 1.2538 | |
6 | I | A | 2.0624 | mutated: QI6A |
7 | W | A | 2.3756 | |
8 | I | A | 1.7985 | mutated: QI8A |
9 | K | A | 0.3512 | |
10 | L | A | 1.6009 | |
11 | L | A | 1.7246 | |
12 | K | A | 0.3131 | |
13 | I | A | 2.0982 | mutated: QI13A |
14 | W | A | 1.9255 |