Project name: query_structure

Status: done

Started: 2026-03-17 01:14:12
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPSGPLDYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAYSLSPPSKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:37)
Show buried residues

Minimal score value
-3.7455
Maximal score value
1.5233
Average score
-0.7741
Total score value
-69.6666

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.1888
2 S A -0.6076
3 D A -1.9426
4 V A -1.7373
5 P A 0.0000
6 R A -3.7455
7 D A -3.5987
8 L A 0.0000
9 E A -2.2007
10 V A 0.0752
11 V A 1.5233
12 A A 0.8795
13 A A 0.2874
14 T A -0.5439
15 P A -1.1489
16 T A -1.0120
17 S A -0.5452
18 L A 0.0000
19 L A 0.7007
20 I A 0.0000
21 S A -1.2054
22 W A 0.0000
23 D A -3.4510
24 A A -2.1136
25 P A -1.3238
26 S A -0.6429
27 G A -0.7022
28 P A -0.6736
29 L A -0.9006
30 D A -1.2645
31 Y A -0.6052
32 Y A 0.0000
33 R A -0.4362
34 I A 0.0000
35 T A 0.0000
36 Y A 0.0000
37 G A 0.0000
38 E A -1.4940
39 T A -1.2238
40 G A -1.2102
41 G A -1.3206
42 N A -1.5099
43 S A -0.8088
44 P A -0.2914
45 V A 0.4707
46 Q A -0.7652
47 E A -1.6059
48 F A -0.6506
49 T A -0.2171
50 V A 0.0000
51 P A -1.0488
52 G A -1.2455
53 S A -1.3374
54 K A -2.0201
55 S A -1.4125
56 T A -0.7834
57 A A 0.0000
58 T A 0.2255
59 I A 0.0000
60 S A -0.6630
61 G A -1.0297
62 L A 0.0000
63 K A -2.3653
64 P A -1.6643
65 G A -1.4502
66 V A -1.4306
67 D A -2.0735
68 Y A 0.0000
69 T A -0.7933
70 I A 0.0000
71 T A -0.1585
72 V A 0.0000
73 Y A -0.0987
74 A A 0.0000
75 Y A -0.3283
76 S A -0.1551
77 L A 1.0183
78 S A 0.0827
79 P A -0.5032
80 P A -0.7056
81 S A -1.3863
82 K A -1.9179
83 P A -1.0637
84 I A -0.5860
85 S A -0.4690
86 I A -0.7076
87 N A -1.7244
88 Y A -1.4603
89 R A -2.5252
90 T A -1.5124
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Laboratory of Theory of Biopolymers 2018