| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPSGPLDYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAYSLSPPSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.1888 | |
| 2 | S | A | -0.6076 | |
| 3 | D | A | -1.9426 | |
| 4 | V | A | -1.7373 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.7455 | |
| 7 | D | A | -3.5987 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.2007 | |
| 10 | V | A | 0.0752 | |
| 11 | V | A | 1.5233 | |
| 12 | A | A | 0.8795 | |
| 13 | A | A | 0.2874 | |
| 14 | T | A | -0.5439 | |
| 15 | P | A | -1.1489 | |
| 16 | T | A | -1.0120 | |
| 17 | S | A | -0.5452 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7007 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.2054 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.4510 | |
| 24 | A | A | -2.1136 | |
| 25 | P | A | -1.3238 | |
| 26 | S | A | -0.6429 | |
| 27 | G | A | -0.7022 | |
| 28 | P | A | -0.6736 | |
| 29 | L | A | -0.9006 | |
| 30 | D | A | -1.2645 | |
| 31 | Y | A | -0.6052 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.4362 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4940 | |
| 39 | T | A | -1.2238 | |
| 40 | G | A | -1.2102 | |
| 41 | G | A | -1.3206 | |
| 42 | N | A | -1.5099 | |
| 43 | S | A | -0.8088 | |
| 44 | P | A | -0.2914 | |
| 45 | V | A | 0.4707 | |
| 46 | Q | A | -0.7652 | |
| 47 | E | A | -1.6059 | |
| 48 | F | A | -0.6506 | |
| 49 | T | A | -0.2171 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.0488 | |
| 52 | G | A | -1.2455 | |
| 53 | S | A | -1.3374 | |
| 54 | K | A | -2.0201 | |
| 55 | S | A | -1.4125 | |
| 56 | T | A | -0.7834 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2255 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6630 | |
| 61 | G | A | -1.0297 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3653 | |
| 64 | P | A | -1.6643 | |
| 65 | G | A | -1.4502 | |
| 66 | V | A | -1.4306 | |
| 67 | D | A | -2.0735 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7933 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1585 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.0987 | |
| 74 | A | A | 0.0000 | |
| 75 | Y | A | -0.3283 | |
| 76 | S | A | -0.1551 | |
| 77 | L | A | 1.0183 | |
| 78 | S | A | 0.0827 | |
| 79 | P | A | -0.5032 | |
| 80 | P | A | -0.7056 | |
| 81 | S | A | -1.3863 | |
| 82 | K | A | -1.9179 | |
| 83 | P | A | -1.0637 | |
| 84 | I | A | -0.5860 | |
| 85 | S | A | -0.4690 | |
| 86 | I | A | -0.7076 | |
| 87 | N | A | -1.7244 | |
| 88 | Y | A | -1.4603 | |
| 89 | R | A | -2.5252 | |
| 90 | T | A | -1.5124 |