| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFTFSDYYMYWVRQAPGKGLEWVAYITKGGGSTYYPDSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCARQTNYDFTMDYWGQGTLVTVSS
L: EIVMTQSPATLSVSPGERATLSCKASQDVGTSVAWYQQKPGQAPRLLIYWASARHTGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYSSYPLTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9247 | |
| 2 | V | H | -0.7886 | |
| 3 | Q | H | -0.7271 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2867 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1580 | |
| 8 | G | H | -0.7291 | |
| 9 | G | H | -0.0024 | |
| 11 | G | H | 0.5453 | |
| 12 | L | H | 1.3444 | |
| 13 | V | H | -0.0060 | |
| 14 | Q | H | -1.3179 | |
| 15 | P | H | -1.5807 | |
| 16 | G | H | -1.3988 | |
| 17 | G | H | -0.9870 | |
| 18 | S | H | -1.1561 | |
| 19 | L | H | -0.8226 | |
| 20 | R | H | -1.7720 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2732 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0311 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8220 | |
| 27 | G | H | -1.1761 | |
| 28 | F | H | -0.6410 | |
| 29 | T | H | -0.5460 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.3635 | |
| 36 | D | H | -1.6418 | |
| 37 | Y | H | -0.7532 | |
| 38 | Y | H | -0.3647 | |
| 39 | M | H | 0.0000 | |
| 40 | Y | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6782 | |
| 45 | A | H | -1.0823 | |
| 46 | P | H | -0.8734 | |
| 47 | G | H | -1.4555 | |
| 48 | K | H | -2.2664 | |
| 49 | G | H | -1.3818 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9474 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | Y | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | -0.6991 | |
| 58 | K | H | -1.5993 | |
| 59 | G | H | -1.4796 | |
| 62 | G | H | -1.1207 | |
| 63 | G | H | -0.9035 | |
| 64 | S | H | -0.3825 | |
| 65 | T | H | 0.2499 | |
| 66 | Y | H | 0.6869 | |
| 67 | Y | H | -0.3541 | |
| 68 | P | H | -1.3577 | |
| 69 | D | H | -2.4161 | |
| 70 | S | H | -1.7152 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4735 | |
| 74 | G | H | -1.7438 | |
| 75 | R | H | -1.5601 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6588 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5005 | |
| 80 | R | H | -1.2752 | |
| 81 | D | H | -1.8187 | |
| 82 | N | H | -2.1091 | |
| 83 | A | H | -1.4583 | |
| 84 | K | H | -2.4067 | |
| 85 | N | H | -1.9249 | |
| 86 | T | H | -1.0654 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4851 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0603 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2968 | |
| 93 | S | H | -1.2341 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.1799 | |
| 96 | A | H | -1.6372 | |
| 97 | E | H | -2.1916 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.4305 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.5610 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | Q | H | 0.0000 | |
| 108 | T | H | 0.0000 | |
| 109 | N | H | -0.6073 | |
| 110 | Y | H | 0.8605 | |
| 112 | D | H | 0.0000 | |
| 113 | F | H | 0.8911 | |
| 114 | T | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.1274 | |
| 118 | W | H | -0.1675 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0115 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.3698 | |
| 123 | L | H | 0.9945 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2082 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6883 | |
| 128 | S | H | -0.4739 | |
| 1 | E | L | -1.4893 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.8239 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.3955 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.5937 | |
| 8 | P | L | -0.4276 | |
| 9 | A | L | -0.3679 | |
| 10 | T | L | -0.4816 | |
| 11 | L | L | -0.2090 | |
| 12 | S | L | -0.3786 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.1074 | |
| 15 | P | L | -1.2389 | |
| 16 | G | L | -1.7892 | |
| 17 | E | L | -2.3530 | |
| 18 | R | L | -2.6188 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6569 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.8342 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -1.9537 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.2522 | |
| 27 | Q | L | -2.4495 | |
| 28 | D | L | -2.9609 | |
| 29 | V | L | 0.0000 | |
| 36 | G | L | -1.3072 | |
| 37 | T | L | -0.6249 | |
| 38 | S | L | 0.0000 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.7359 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5354 | |
| 46 | P | L | -1.0596 | |
| 47 | G | L | -1.4693 | |
| 48 | Q | L | -2.1189 | |
| 49 | A | L | -1.3888 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.3459 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.2046 | |
| 56 | W | L | 0.3925 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.4322 | |
| 66 | A | L | -0.4602 | |
| 67 | R | L | -1.1535 | |
| 68 | H | L | -0.8668 | |
| 69 | T | L | -0.5677 | |
| 70 | G | L | -0.6282 | |
| 71 | I | L | -0.5981 | |
| 72 | P | L | -0.4153 | |
| 74 | A | L | -0.3849 | |
| 75 | R | L | -0.7190 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.5377 | |
| 78 | G | L | -0.4070 | |
| 79 | S | L | -0.6480 | |
| 80 | G | L | -1.1163 | |
| 83 | S | L | -1.3839 | |
| 84 | G | L | -1.9850 | |
| 85 | T | L | -2.4081 | |
| 86 | E | L | -2.8217 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8062 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6225 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4630 | |
| 93 | S | L | -1.7545 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.7305 | |
| 96 | S | L | -1.0680 | |
| 97 | E | L | -1.6831 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3245 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.2165 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | S | L | -0.3341 | |
| 109 | S | L | -0.1921 | |
| 114 | Y | L | 0.2310 | |
| 115 | P | L | -0.4113 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.0704 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.7071 | |
| 121 | G | L | -0.7371 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.8329 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.0739 | |
| 126 | I | L | 0.8076 | |
| 127 | K | L | -0.9196 |