Project name: 8JEL

Status: done

Started: 2026-03-30 05:50:27
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Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASGFTFSDYYMYWVRQAPGKGLEWVAYITKGGGSTYYPDSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCARQTNYDFTMDYWGQGTLVTVSS
L: EIVMTQSPATLSVSPGERATLSCKASQDVGTSVAWYQQKPGQAPRLLIYWASARHTGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYSSYPLTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:02)
Show buried residues

Minimal score value
-2.9609
Maximal score value
1.3444
Average score
-0.5761
Total score value
-130.1948

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9247
2 V H -0.7886
3 Q H -0.7271
4 L H 0.0000
5 V H 1.2867
6 E H 0.0000
7 S H -0.1580
8 G H -0.7291
9 G H -0.0024
11 G H 0.5453
12 L H 1.3444
13 V H -0.0060
14 Q H -1.3179
15 P H -1.5807
16 G H -1.3988
17 G H -0.9870
18 S H -1.1561
19 L H -0.8226
20 R H -1.7720
21 L H 0.0000
22 S H -0.2732
23 C H 0.0000
24 A H -0.0311
25 A H 0.0000
26 S H -0.8220
27 G H -1.1761
28 F H -0.6410
29 T H -0.5460
30 F H 0.0000
35 S H -1.3635
36 D H -1.6418
37 Y H -0.7532
38 Y H -0.3647
39 M H 0.0000
40 Y H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6782
45 A H -1.0823
46 P H -0.8734
47 G H -1.4555
48 K H -2.2664
49 G H -1.3818
50 L H 0.0000
51 E H -0.9474
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 Y H 0.0000
56 I H 0.0000
57 T H -0.6991
58 K H -1.5993
59 G H -1.4796
62 G H -1.1207
63 G H -0.9035
64 S H -0.3825
65 T H 0.2499
66 Y H 0.6869
67 Y H -0.3541
68 P H -1.3577
69 D H -2.4161
70 S H -1.7152
71 V H 0.0000
72 K H -2.4735
74 G H -1.7438
75 R H -1.5601
76 F H 0.0000
77 T H -0.6588
78 I H 0.0000
79 S H -0.5005
80 R H -1.2752
81 D H -1.8187
82 N H -2.1091
83 A H -1.4583
84 K H -2.4067
85 N H -1.9249
86 T H -1.0654
87 L H 0.0000
88 Y H -0.4851
89 L H 0.0000
90 Q H -1.0603
91 M H 0.0000
92 N H -1.2968
93 S H -1.2341
94 L H 0.0000
95 R H -2.1799
96 A H -1.6372
97 E H -2.1916
98 D H 0.0000
99 T H -0.4305
100 A H 0.0000
101 V H 0.5610
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 Q H 0.0000
108 T H 0.0000
109 N H -0.6073
110 Y H 0.8605
112 D H 0.0000
113 F H 0.8911
114 T H 0.0000
115 M H 0.0000
116 D H 0.0000
117 Y H 0.1274
118 W H -0.1675
119 G H 0.0000
120 Q H -1.0115
121 G H 0.0000
122 T H 0.3698
123 L H 0.9945
124 V H 0.0000
125 T H 0.2082
126 V H 0.0000
127 S H -0.6883
128 S H -0.4739
1 E L -1.4893
2 I L 0.0000
3 V L 0.8239
4 M L 0.0000
5 T L -0.3955
6 Q L 0.0000
7 S L -0.5937
8 P L -0.4276
9 A L -0.3679
10 T L -0.4816
11 L L -0.2090
12 S L -0.3786
13 V L 0.0000
14 S L -1.1074
15 P L -1.2389
16 G L -1.7892
17 E L -2.3530
18 R L -2.6188
19 A L 0.0000
20 T L -0.6569
21 L L 0.0000
22 S L -0.8342
23 C L 0.0000
24 K L -1.9537
25 A L 0.0000
26 S L -1.2522
27 Q L -2.4495
28 D L -2.9609
29 V L 0.0000
36 G L -1.3072
37 T L -0.6249
38 S L 0.0000
39 V L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.7359
44 Q L 0.0000
45 K L -1.5354
46 P L -1.0596
47 G L -1.4693
48 Q L -2.1189
49 A L -1.3888
50 P L 0.0000
51 R L -1.3459
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.2046
56 W L 0.3925
57 A L 0.0000
65 S L -0.4322
66 A L -0.4602
67 R L -1.1535
68 H L -0.8668
69 T L -0.5677
70 G L -0.6282
71 I L -0.5981
72 P L -0.4153
74 A L -0.3849
75 R L -0.7190
76 F L 0.0000
77 S L -0.5377
78 G L -0.4070
79 S L -0.6480
80 G L -1.1163
83 S L -1.3839
84 G L -1.9850
85 T L -2.4081
86 E L -2.8217
87 F L 0.0000
88 T L -0.8062
89 L L 0.0000
90 T L -0.6225
91 I L 0.0000
92 S L -1.4630
93 S L -1.7545
94 L L 0.0000
95 Q L -1.7305
96 S L -1.0680
97 E L -1.6831
98 D L 0.0000
99 F L -0.3245
100 A L 0.0000
101 V L -0.2165
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 S L -0.3341
109 S L -0.1921
114 Y L 0.2310
115 P L -0.4113
116 L L 0.0000
117 T L -0.0704
118 F L 0.0000
119 G L 0.0000
120 G L -0.7071
121 G L -0.7371
122 T L 0.0000
123 K L -0.8329
124 V L 0.0000
125 E L -0.0739
126 I L 0.8076
127 K L -0.9196
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Laboratory of Theory of Biopolymers 2018