| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGYTFTNYGMNWVRQAPGKGLEWVGWINTYTGEPTYAADFKRRFTFSLDTSKSTAYLQMNSLRAEDTAVYYCAKYPHYYGSSHWYFDVWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCSASQDISNYLNWYQQKPGKAPKVLIYFTSSLHSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYSTVPWTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9447 | |
| 2 | V | H | -0.8979 | |
| 3 | Q | H | -0.9904 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1427 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2210 | |
| 8 | G | H | -0.5555 | |
| 9 | G | H | 0.1040 | |
| 11 | G | H | 0.7532 | |
| 12 | L | H | 1.3283 | |
| 13 | V | H | -0.0570 | |
| 14 | Q | H | -1.3114 | |
| 15 | P | H | -1.3708 | |
| 16 | G | H | -1.4187 | |
| 17 | G | H | -1.1794 | |
| 18 | S | H | -1.1796 | |
| 19 | L | H | -0.8889 | |
| 20 | R | H | -1.8592 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2498 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0889 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7685 | |
| 27 | G | H | -1.0669 | |
| 28 | Y | H | -0.5636 | |
| 29 | T | H | -0.3961 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.1131 | |
| 36 | N | H | -0.9772 | |
| 37 | Y | H | -0.3326 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7509 | |
| 45 | A | H | -1.0743 | |
| 46 | P | H | -0.8136 | |
| 47 | G | H | -1.4787 | |
| 48 | K | H | -2.3729 | |
| 49 | G | H | -1.6481 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.4081 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | W | H | -0.1137 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.6227 | |
| 58 | T | H | 0.0000 | |
| 59 | Y | H | 0.6392 | |
| 62 | T | H | -0.1269 | |
| 63 | G | H | -0.7927 | |
| 64 | E | H | -1.8115 | |
| 65 | P | H | -1.0781 | |
| 66 | T | H | -0.4984 | |
| 67 | Y | H | -0.7706 | |
| 68 | A | H | 0.0000 | |
| 69 | A | H | -1.6610 | |
| 70 | D | H | -2.7071 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.1554 | |
| 74 | R | H | -3.2327 | |
| 75 | R | H | -2.2202 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -1.0825 | |
| 78 | F | H | 0.0000 | |
| 79 | S | H | -0.3830 | |
| 80 | L | H | -0.2290 | |
| 81 | D | H | -0.8385 | |
| 82 | T | H | -0.6531 | |
| 83 | S | H | -1.1330 | |
| 84 | K | H | -1.9236 | |
| 85 | S | H | -1.0109 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3475 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1576 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.4848 | |
| 93 | S | H | -1.4155 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2222 | |
| 96 | A | H | -1.6470 | |
| 97 | E | H | -2.1832 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3645 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7245 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | Y | H | 0.0000 | |
| 108 | P | H | 0.0000 | |
| 109 | H | H | -0.2243 | |
| 110 | Y | H | 0.8877 | |
| 111 | Y | H | 1.2289 | |
| 111A | G | H | 0.2097 | |
| 112B | S | H | -0.0384 | |
| 112A | S | H | 0.1672 | |
| 112 | H | H | 0.4165 | |
| 113 | W | H | 0.3667 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.3480 | |
| 117 | V | H | -0.0898 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2993 | |
| 121 | G | H | -0.3393 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.5986 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3229 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4809 | |
| 128 | S | H | -0.5358 | |
| 1 | D | L | -1.9764 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.9876 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.8778 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.5476 | |
| 8 | P | L | -0.5093 | |
| 9 | S | L | -0.7965 | |
| 10 | S | L | -0.9534 | |
| 11 | L | L | -0.7616 | |
| 12 | S | L | -0.9305 | |
| 13 | A | L | -0.9362 | |
| 14 | S | L | -0.7354 | |
| 15 | V | L | 0.3014 | |
| 16 | G | L | -0.6211 | |
| 17 | D | L | -1.7216 | |
| 18 | R | L | -2.2344 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6264 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5796 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -1.4727 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9337 | |
| 27 | Q | L | -2.5855 | |
| 28 | D | L | -2.6700 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.0188 | |
| 37 | N | L | -0.3641 | |
| 38 | Y | L | 0.5990 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.7011 | |
| 44 | Q | L | -1.1016 | |
| 45 | K | L | -1.4001 | |
| 46 | P | L | -1.1332 | |
| 47 | G | L | -1.6707 | |
| 48 | K | L | -2.5447 | |
| 49 | A | L | -1.5165 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1430 | |
| 52 | V | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.7356 | |
| 56 | F | L | 1.0138 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | 0.0316 | |
| 66 | S | L | 0.3128 | |
| 67 | L | L | 0.4310 | |
| 68 | H | L | -0.1781 | |
| 69 | S | L | -0.3553 | |
| 70 | G | L | -0.4918 | |
| 71 | V | L | -0.2702 | |
| 72 | P | L | -0.3495 | |
| 74 | S | L | -0.4146 | |
| 75 | R | L | -0.8172 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3169 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.6495 | |
| 80 | G | L | -1.0152 | |
| 83 | S | L | -1.1770 | |
| 84 | G | L | -1.7474 | |
| 85 | T | L | -2.0975 | |
| 86 | D | L | -2.4641 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6415 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6025 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3398 | |
| 93 | S | L | -1.1757 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.6702 | |
| 96 | P | L | -0.8194 | |
| 97 | E | L | -1.1426 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2034 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8146 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | S | L | -0.0344 | |
| 109 | T | L | 0.2724 | |
| 114 | V | L | 0.8324 | |
| 115 | P | L | 0.1365 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.7550 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.5701 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4295 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.4171 | |
| 126 | I | L | -0.8296 | |
| 127 | K | L | -1.5332 |